DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS3 and C18D1.2

DIOPT Version :9

Sequence 1:NP_608572.1 Gene:MFS3 / 33292 FlyBaseID:FBgn0031307 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_496174.2 Gene:C18D1.2 / 182781 WormBaseID:WBGene00007669 Length:478 Species:Caenorhabditis elegans


Alignment Length:423 Identity:90/423 - (21%)
Similarity:154/423 - (36%) Gaps:66/423 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 LLSCYFWGYLVSQIPLAHVAENFSAKWVMLFSVAINVVCTLLTPVFTELHYGGLILMRVLEGVGG 174
            |.|....|.:.:..|..::.:...::.|:.|....:...|.:.|....|.:..|:.||.|:|:|.
 Worm    84 LFSAVAIGAMCAVYPFMYIIQKKGSRSVVTFVGLFSAATTAMIPWAAYLGFYPLLAMRFLQGIGL 148

  Fly   175 GASFPAMHVMIASWAPPTERMVMSTIIYVGTSAGTALSILLAGV-CSAQWGWESVFYVMGALSCI 238
            ...|..:.::...|:...:.......:......|...::.:|.. |::.:||.:|:|....::..
 Worm   149 STGFTLIGIVTRQWSMQVQGAFFFACLSCFFQIGPIFTMPVASAFCTSSFGWPAVYYTHSIVTIF 213

  Fly   239 WMLLWVILVQDNPNKQRFISLEERQMITSSLGTEQKTEHHPAVPWGKVFTSVPFWAILIAHTCSN 303
            ..||:..|.:::|.....::..|...|....| |.|.:..|.|...:....:..|...:|    |
 Worm   214 IFLLFFTLYRESPVFHTIVTELELSKIQRGKG-ETKRQRVPLVQILRDPVVLSIWTTALA----N 273

  Fly   304 F-GWYMFLIEIPFYMKQVLKFNVASNAALSALPYFPMIIFSICLGKLLDSLQ-AKGKITTTVARK 366
            | |..:.:...|.|:.::|.|:|......||||........:..|...|.|| ...|.:..:...
 Worm   274 FMGIQLTMQFTPTYLHKILGFSVQDTGPFSALPQVITAFVKVSAGYSADKLQCCTPKTSVRIFNS 338

  Fly   367 TATS-----------ICTLIPGVCLLVLCYIGCRHYEAVSVMSVGIVAMGSMFSGFL-------- 412
            .|..           |.|.:|.:.|.:|            ::|..|:  |....||.        
 Worm   339 LALGGMSFMFVGLAIIPTSMPYLGLFML------------ILSCSII--GFNCGGFFRCSAIYAA 389

  Fly   413 -SNHIDIAPN-FAGTLVALTNTAATLPGIVVPLFVGFVTKGNQNIGAWRIIFGVTIVLFALEFLV 475
             .||..:..| |...|.||      |..::|.:||     .|.....|..::....|:..|..||
 Worm   390 QHNHFVMGMNSFLNCLAAL------LAPVIVNIFV-----ENDTWNEWYWVWMSHFVILFLSNLV 443

  Fly   476 FVFLGSGSEQPWNKAGTPKDPEAKDEKTPLKEL 508
            |.....|....|.|            |||.|::
 Worm   444 FQIYAKGEPAEWTK------------KTPGKDI 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS3NP_608572.1 2A0114euk 19..489 CDD:129972 85/402 (21%)
MFS 100..479 CDD:119392 83/392 (21%)
C18D1.2NP_496174.2 MFS 36..448 CDD:391944 83/393 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.