DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS3 and slc-17.8

DIOPT Version :9

Sequence 1:NP_608572.1 Gene:MFS3 / 33292 FlyBaseID:FBgn0031307 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001023848.1 Gene:slc-17.8 / 179234 WormBaseID:WBGene00017798 Length:527 Species:Caenorhabditis elegans


Alignment Length:516 Identity:132/516 - (25%)
Similarity:222/516 - (43%) Gaps:58/516 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTDEVPAKGSILG-KLVPA-RYVLALLGSIGMAIVYGLKVNLSVAMVAMVNHTAIKAHGDGGGHG 63
            ::|.:|::...|. :..|: |::.:::.......|:.:..|:.:|:|.|||              
 Worm    33 ISDGIPSQQRPLTYRWFPSWRFMTSIMLCFCFGCVHLMNSNMGMAIVCMVN-------------- 83

  Fly    64 GHGSVILSNASQVSLVEECNPPGGASNVTAKVEDGPFDWSEPLQGTLLSCYFWGYLVSQIPLAHV 128
                      |..:...|..|...|..:         |||...||.:.|.:..|.|| .:....:
 Worm    84 ----------SSATYDNETYPENAAPLL---------DWSSDEQGYIFSAFNAGLLV-MLFTGGM 128

  Fly   129 AENFSAKWVMLFSVAINVVCTLLTPVFTELHYGGLILMRVLEGVGGGASFPAMHVMIASWAPPTE 193
            |:.|:||:::|.||||..:.....|....:.....|..|.|.|.......|||:.:|..|.|.:|
 Worm   129 ADKFNAKYMILVSVAIASLANFTLPWMAPISVYWAIFSRFLVGFADALLQPAMNSLITRWFPTSE 193

  Fly   194 RMVMSTIIYVGTSAGTALSILLAGVCSAQ----WGWESVFYVMGALSCIWMLLWVILVQDNPNKQ 254
            |.....:...|...||.:.|..||...:|    .||.|:||:.|.:..:::..::.|..|.|:||
 Worm   194 RSYALGLATGGRQIGTLIIIPAAGALCSQTEIFGGWPSIFYLSGFIGVLFIFSYIFLGADKPSKQ 258

  Fly   255 RFISLEERQMITSSLGTE----QKTEHHPAVPWGKVFTSVPFWAILIAHTCSNFGWYMFLIEIPF 315
            ..||..|.:.||.|..:|    ::||.  .|||..:..|...||.:|:..|..|.....::.:|.
 Worm   259 SCISDNELKFITISNQSEDVGKKRTER--KVPWKNILKSGAVWASVISLVCHEFPLMTLIMFLPS 321

  Fly   316 YMKQVLKFNVASNAALSALPYFPMIIFSICLGKLLDSLQAKGKITT----TVARKTATSICTLIP 376
            |:..|..::...|..|||||...:....|....|...||   |.||    |:. |...||.::..
 Worm   322 YLHDVHHYHSTENGILSALPTVSLWFAKIGSSYLNTWLQ---KNTTWKKDTIC-KVLNSIGSIGL 382

  Fly   377 GVCLLVLCYIGCRH-YEAVSVMSVGIVAMGSMFSGFLSNHIDIAPNFAGTLVALTNTAATLPGIV 440
            ||.||...::...| :.||..:.:.:.:.|....|.....:.:||.::|.:...|.....:.||:
 Worm   383 GVFLLAATFLDNEHAWMAVLFLCLSMASAGLHTPGCQLALVSVAPAYSGAVTGFTFFFVAVSGII 447

  Fly   441 VPLFVGFVTKGNQNIGAWRIIFGVTIVLFALEFLVFVFLGSGSEQPW--NKAGTPKDPEAK 499
            .|:....:.| ::....|.::|.::.|:.....::|...||...|.|  :||...::|..|
 Worm   448 HPIITKMIVK-DRTAAEWNLVFYISTVIAIFPIIIFNVWGSTEVQWWAKSKASMQQEPNNK 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS3NP_608572.1 2A0114euk 19..489 CDD:129972 124/484 (26%)
MFS 100..479 CDD:119392 108/391 (28%)
slc-17.8NP_001023848.1 MFS_SLC17 57..486 CDD:340876 119/469 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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