DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS3 and slc-17.2

DIOPT Version :9

Sequence 1:NP_608572.1 Gene:MFS3 / 33292 FlyBaseID:FBgn0031307 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_499065.1 Gene:slc-17.2 / 176317 WormBaseID:WBGene00008000 Length:493 Species:Caenorhabditis elegans


Alignment Length:508 Identity:156/508 - (30%)
Similarity:252/508 - (49%) Gaps:46/508 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KLVPA-RYVLALLGSIGMAIVYGLKVNLSVAMVAMVNHTAIKAHGDGGGHGGHGSVILSNASQVS 77
            :|||: |:.|:|:...|..:.|.::.|:|.|:|.|||....    |.|               |.
 Worm     9 RLVPSTRFALSLVMFFGCLVTYMMRTNMSFAVVCMVNENKT----DTG---------------VE 54

  Fly    78 LVEEC----NPPGGASNVTAKVEDGPFDWSEPLQGTLLSCYFWGYLVSQIPLAHVAENFSAKWVM 138
            .|..|    .|....|:|.     |.|||.:...|.:||.:|:||:.|||...|:|..:..|.|:
 Worm    55 KVSRCGKEMTPVESNSSVI-----GEFDWDKQTTGMVLSSFFYGYIGSQIIGGHLASRYGGKRVV 114

  Fly   139 LFSVAINVVCTLLTPVFTELHYGGLILMRVLEGVGGGASFPAMHVMIASWAPPTERMVMSTIIYV 203
            ..::..:.:.|||.||........|.::|...|...||:|||||.|.:.|.||.|..|::.:.|.
 Worm   115 FVTILGSALLTLLNPVAARTSEYALAILRAAIGFLQGATFPAMHTMWSVWGPPLELSVLTGVTYA 179

  Fly   204 GTSAGTALSILLAG-VCSAQW--GWESVFYVMGALSCIWMLLWVILVQDNPNKQRFISLEERQMI 265
            |...|..:.:.|:| :|...:  ||.|:||::|....:|..:|..:..|.|.....|:.||:|.|
 Worm   180 GAQIGNVIVLPLSGFLCEYGFDGGWPSIFYIIGVFGVLWTAVWWYVSSDKPATHPRITPEEKQYI 244

  Fly   266 T----SSLGTEQKTEHHPAVPWGKVFTSVPFWAILIAHTCSNFGWYMFLIEIPFYMKQVLKFNVA 326
            .    :|:|.:  |...|:.||.|:.||...||....|...::|.|..|:.:|.::|.||..|::
 Worm   245 VTAVEASMGKD--TGKVPSTPWIKILTSPAVWACWAGHFAGDWGAYTMLVSLPSFLKDVLGLNLS 307

  Fly   327 SNAALSALPYFPMIIFSICLGKLLDSLQAKGKITTTVARKTATSICTLIPGVCLLVLCYIGCRHY 391
            |..|::::||....:.....|.|.|:|::||.::|...|:.|..:..:..|:.|:...|.||...
 Worm   308 SLGAVASIPYIAYFLAINAGGVLADTLRSKGILSTLNTRRAAMLVALIGQGIFLVASGYCGCGQD 372

  Fly   392 EAVSV-MSVGIVAMGSMFSGFLSNHIDIAPNFAGTLVALTNTAATLPGIVVPLFVGFVT-KGNQN 454
            ..|.: ::.|:...|..::||:.|:::|||.|:||::...||.:.|.||:.|....::| .|.|.
 Worm   373 VLVIIFITCGMAISGLQYAGFVVNYLEIAPPFSGTVMGTGNTISALAGIISPAVSSYLTPNGTQE 437

  Fly   455 IGAWRIIFGVTIVLFALEFLVFVFLGSGSEQPWNKAGTPKDPEAKDEKTPLKE 507
              .|:::..:|..:..:..|:|....||..|||.|.    ..|...|..||:|
 Worm   438 --EWQMVLWLTAGILTIGALLFSIFASGEVQPWAKL----TAEEGHEMAPLRE 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS3NP_608572.1 2A0114euk 19..489 CDD:129972 147/482 (30%)
MFS 100..479 CDD:119392 121/387 (31%)
slc-17.2NP_499065.1 2A0114euk 4..475 CDD:129972 151/497 (30%)
MFS 70..461 CDD:119392 124/399 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3068
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D378598at33208
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.870

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