DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS3 and F41C3.2

DIOPT Version :9

Sequence 1:NP_608572.1 Gene:MFS3 / 33292 FlyBaseID:FBgn0031307 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_494849.2 Gene:F41C3.2 / 173821 WormBaseID:WBGene00018268 Length:499 Species:Caenorhabditis elegans


Alignment Length:520 Identity:124/520 - (23%)
Similarity:214/520 - (41%) Gaps:85/520 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KLVPAR---YVLALLGSIGMAIVYGLKVNLSVAMVAMVNHTAIKAHGDGGGHGGHGSVILSNASQ 75
            |.:|.|   |:        .|||.|| :.|..|.|.:.|.|                |:.....|
 Worm    27 KKIPGRMRWYI--------CAIVTGL-MTLVQANVHVYNFT----------------VLCMQEEQ 66

  Fly    76 VSLVEECNPPGGASNVTAKVEDGPFDWSEPLQGTLLSCYFWGYLVSQIPLAHVAENFSAKWVMLF 140
                |:.|....:.|.|.......|::|:..|..|.|..:...|.|.|.|..:......|...|.
 Worm    67 ----EKANNESLSRNETILPSSLNFNFSKFEQDLLFSAAYIAPLPSIIILYFLTNRSGVKTTFLI 127

  Fly   141 SVAINVVCTLLTPVFTELHYGGLILMRVLEGVGGGASFPAMHVMIASWAPPTERMVMSTIIYVGT 205
            ...::.:.|:|||:.|:..:......|..:|:........:.|:...|:..||.....:|:....
 Worm   128 CSMLSFLSTILTPIATQYGFWFFWAARFFQGLPTAILGIVVSVVTCHWSTLTENGTYVSILAAHY 192

  Fly   206 SAGTALSILLAGVCSAQWGWESVFYVMGALSCIWMLLWVILVQDNPNKQRFISLEERQMITSSLG 270
            .....|::.|:.:..:..||.||:|..|.::.|.::|:.:...|.|::.:|:|..|.:.|.....
 Worm   193 QIAPLLTMPLSALMCSVGGWSSVYYTQGTITAILIVLFAVFYTDKPSESKFVSKGELKAIEDGKS 257

  Fly   271 TEQKTEHHPAVPWGKVFTSVPFWAILIAHTCSNFGWYMFLIEIPFYMKQVLKFNVASNAALSALP 335
            .|:|.......|:..:......|||.|.......|:.:||...|.|:.:||.:|:::....:|:|
 Worm   258 LEEKHVEKSKTPFVAIHKDPAVWAIWITSVGGTIGFSIFLQYGPTYLNKVLHYNLSTTGWTAAVP 322

  Fly   336 YFPMIIFSICLGKLL-DSLQAK----GK-----ITTTVARKTATSICTLIPGVCLLVLCYI---- 386
            |    ||| |:.::: ..|.|.    |:     :|||:::.|.        .:|.|||.:|    
 Worm   323 Y----IFS-CIARIVAQPLSANCSFLGERLAAIVTTTISQGTM--------AICFLVLMFIPQTW 374

  Fly   387 ---GCRHYEAVSVMSVGIVAMGSMFSGFL--SNHIDIAPNFAGTLVALTNTAATLPGIVVPLFVG 446
               |...|..| :::.|:..:|...|..|  ..|:    :|..|..|..|.:.   |:.:||.|.
 Worm   375 SSVGQLCYSLV-IVANGLNGVGITRSAQLVCKQHM----SFVYTARAFYNGSV---GLFLPLLVN 431

  Fly   447 FVTKGNQNIGAWRIIFGVTIVLFALEF---LVFVFLGSGSEQPWNKAGTPK-----DPEAKDEKT 503
            ||.. |.....|..:|   :::|.:.|   |:|:...|.....|. .||.:     :.:.:|:|:
 Worm   432 FVAP-NDTHNEWTRLF---LIIFCIVFVSNLIFIAFSSTEPAQWT-IGTSEVDNRSEQDLEDQKS 491

  Fly   504  503
             Worm   492  491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS3NP_608572.1 2A0114euk 19..489 CDD:129972 118/494 (24%)
MFS 100..479 CDD:119392 98/400 (25%)
F41C3.2NP_494849.2 2A0114euk 30..471 CDD:129972 118/494 (24%)
MFS 86..463 CDD:119392 98/401 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.