DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14340 and rsbp-1

DIOPT Version :10

Sequence 1:NP_608567.2 Gene:CG14340 / 33287 FlyBaseID:FBgn0031302 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_492439.1 Gene:rsbp-1 / 172729 WormBaseID:WBGene00011531 Length:171 Species:Caenorhabditis elegans


Alignment Length:221 Identity:54/221 - (24%)
Similarity:77/221 - (34%) Gaps:79/221 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 QKLITEINCYVAQFRELLIFIGQARDSPELREKIRKLRRSCVDACKHTAHLITPQ--------PR 110
            |:|:.|.|..:|.||.....||.|:|...||.::....|:|..|.:...:::.||        .|
 Worm    13 QELVHECNVQLALFRVATQGIGTAQDGASLRREVETAGRACQKAVEAANNVVLPQLRADEAEIAR 77

  Fly   111 H------CLGSPSERMHLTLLYHLTLQFQHELIKSHRLIQLVPLDMTEYYAPSRTAPSNLGNVIS 169
            |      |:|:                   .||:..|.::|      |...|:.|.||       
 Worm    78 HGSLFIGCVGA-------------------YLIEMKRCVKL------EKTFPAPTEPS------- 110

  Fly   170 QFLLCKQINPDFQQEELCSIVKDSQELSELLEELQAHMPLTEASPEFDLDPTQKSESSLVSLNTP 234
                   :.|  ||.|...::.|:      ||.|......|...|  .||..|.         ||
 Worm   111 -------VTP--QQVERVEVILDT------LENLITVHYSTNEQP--CLDKLQV---------TP 149

  Fly   235 DWYARQRRRSCKSRSRSLCCCLARKS 260
               .|:|..||    |..|.|...|:
 Worm   150 ---RRRRATSC----RPQCVCSKLKT 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14340NP_608567.2 Syntaxin_2 56..>105 CDD:464199 15/48 (31%)
rsbp-1NP_492439.1 None

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