| Sequence 1: | NP_001259853.1 | Gene: | mtRNApol / 33285 | FlyBaseID: | FBgn0261938 | Length: | 1369 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_005259637.3 | Gene: | POLRMT / 5442 | HGNCID: | 9200 | Length: | 1237 | Species: | Homo sapiens |
| Alignment Length: | 1351 | Identity: | 505/1351 - (37%) |
|---|---|---|---|
| Similarity: | 726/1351 - (53%) | Gaps: | 179/1351 - (13%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 60 MPAGAITAKTTTTTTRTQTTTPTQTDAVAQAKKKRLRKPRYAKYVELLEVTEQAISERRSRVKRL 124
Fly 125 KSKKLADFIHKAQQQILERRAREDRKD--KKTKCVLDLAQRQPVEYQKIDMEALDGSILESGVYD 187
Fly 188 DRPMLFFGKDEYTKQVIANPEEVQNILKSFQ------NFRDIIESMEND-----QHEADFGLSTT 241
Fly 242 KVHPEEHEMLDPFEAIEPYISPLDKSKRSVTTVAVPNASAVTTKSKKRFKSKVHVNEEQERLAKQ 306
Fly 307 RALHINLNTYLNVCVSANMLNRALSTIIAYRGKVRKSSLPHMSEGLITIDLYNILLHGYAGKGSF 371
Fly 372 DRAQEVFKLIEEDGLSFNEQTYAAIFECLGRLEPDEENHQYISEYVSKAEKEGFSLNQIMDRSKF 436
Fly 437 VADQRDIALDAIRRLRPDFK-PVYVPPQLGYDNELLDHLNEHVIPVGAKKEPGKADYAIMNSKRG 500
Fly 501 YTAAQLEQLAREQLKIELDGSITIKSIEK----SKEFANSEKCRELLKELEDTWRKQISAAIVRD 561
Fly 562 LNTLRAQVRFKPHGFMNYYTYLKTLDASHFADILIKELYKLAEGSETFSPTVGQLYKELGQKVQQ 626
Fly 627 RYQIEQKKHNGTLEKIGEIYSSYCELWGSGMSQDN---TRQAWQRLVYEQRESGPSMDLLEVPWP 688
Fly 689 SNVLTGVGRFLYNILMRDIKIDAHIMRQKSKSKAAAQPQNLLPAFYTL--FRNQGRFVKE--EVK 749
Fly 750 PHPVLSRLFRASRQQTLTFDSNLVPMLCPPQPWSTPHNGGYLLNKTELIRLPHQAIQQWDRIMAS 814
Fly 815 NPQHLYPALDSLNQLASVPWRVNTQLLDVIIKVFQNGGDVKLDVPQPPSSLP-------PLPTLP 872
Fly 873 AKDAEGNATSSEDRAKQFRDKLGHRRKQA-EMYSLWCDALYRLSLAQHYRDKVFWLPHNMDFRGR 936
Fly 937 VYPVPPHLNHLGSDLARSMLIFDQAQPLGVDGLSWLKLHCINLTGLKKRDSVRERLLYAEEIMPD 1001
Fly 1002 ILDSADNPLTGRMWWSKSDEPWQTLACCMEIANVHRCPDPAAYLSRFPIHQDGSCNGLQHYAALG 1066
Fly 1067 RDEAGARSVNLAPSAIPQDVYSAVAALVEKSRKADAQNGLHVAEALAGFVRRKVIKQTVMTTVYG 1131
Fly 1132 VTRYGARLQIARQLKDIDDFPKDWVWPASTYLTTKTFESLREMFTSTREIQDWFTECARLISGVC 1196
Fly 1197 SQNVEWVTPLGLPVVQPYNRQEMKHSPRSGFK-VSANMPMDLYERPNILKQKNAFPPNFIHSLDS 1260
Fly 1261 SHMMLTSLH-------CERQGITFVSVHDCFWTHANTVPELNRMCREQFVALHSQPILEQLSEFM 1318
Fly 1319 RHTYSFKDSDFINDGSVEDLSKRQLNRILKQMPQKGDFDLRNVLDSVYFFS 1369 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| mtRNApol | NP_001259853.1 | RPO41 | 286..1369 | CDD:227439 | 460/1110 (41%) |
| PPR repeat | 314..342 | CDD:276811 | 4/27 (15%) | ||
| PPR repeat | 355..384 | CDD:276811 | 8/28 (29%) | ||
| PPR | 358..386 | CDD:279828 | 7/27 (26%) | ||
| RPOL_N | 513..829 | CDD:291372 | 96/326 (29%) | ||
| RNA_pol | 962..1368 | CDD:279308 | 240/413 (58%) | ||
| POLRMT | XP_005259637.3 | PPR repeat | 261..290 | CDD:276811 | 8/28 (29%) |
| PPR repeat | 296..323 | CDD:276811 | 8/29 (28%) | ||
| RPOL_N | 432..704 | CDD:317144 | 87/296 (29%) | ||
| RNA_pol | 831..1236 | CDD:307200 | 240/413 (58%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C165158838 | |
| Domainoid | 1 | 1.000 | 497 | 1.000 | Domainoid score | I355 |
| eggNOG | 1 | 0.900 | - | - | E1_COG5108 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H37996 | |
| Inparanoid | 1 | 1.050 | 801 | 1.000 | Inparanoid score | I505 |
| Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S2671 |
| OMA | 1 | 1.010 | - | - | QHG47603 | |
| OrthoDB | 1 | 1.010 | - | - | D135329at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0003398 | |
| OrthoInspector | 1 | 1.000 | - | - | oto91826 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101824 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR10102 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1209 |
| SonicParanoid | 1 | 1.000 | - | - | X2294 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 16 | 15.790 | |||||