| Sequence 1: | NP_001259853.1 | Gene: | mtRNApol / 33285 | FlyBaseID: | FBgn0261938 | Length: | 1369 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_004910992.2 | Gene: | polrmt / 100488061 | XenbaseID: | XB-GENE-5893260 | Length: | 1234 | Species: | Xenopus tropicalis |
| Alignment Length: | 1283 | Identity: | 505/1283 - (39%) |
|---|---|---|---|
| Similarity: | 738/1283 - (57%) | Gaps: | 126/1283 - (9%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 104 VELLEVTEQAISERRSRVKRLKSKKLADFIHKAQQQILERRAREDRKDKKTKCVLDLAQRQPVEY 168
Fly 169 QKIDMEALDGSILESGVYDDRPMLFFGKDEYTKQVIANPEEVQNILKSFQNFRDIIESMENDQHE 233
Fly 234 ADFGLSTTKVHPEEHEMLDPFEAIEPYISPLDKSKRSV--TTVAVPNASAVTTKSKKRFKSKVHV 296
Fly 297 -NEEQERLAKQR------ALHINLNTYLNVCVSANMLNRALSTIIAYRGKVRKSSLPHMSEGLIT 354
Fly 355 IDLYNILLHGYAGKGSFDRAQEVFKLIEEDGLSFNEQTYAAIFECLGRLEPDEENHQYISEYVSK 419
Fly 420 AEKEGFSLNQIMDRSKFVADQRDIALDAIRRLRPDFKPVYVPPQLGYDNELLDHLNEHVIPVGAK 484
Fly 485 KEPGKADYAIMNSKRGYTAAQLEQLAREQLKIELDGSITIKSIEKSKEFANSEK-CRELLKELED 548
Fly 549 TWRKQISAAIVRDLNTLRAQVRFKPHGFMNYYTYLKTLDASHFADILIKELYKLAEGSETFSPTV 613
Fly 614 GQLYKELGQKVQQRYQIEQKKHNGTLEKIGEIYSSYCELWG-----SGMSQDNTRQAWQRLVYEQ 673
Fly 674 RE-SGPSMDLLEVPWPSNVLTGVGRFLYNILMRDIKIDAHIMRQKSKSKAAAQPQNLLPAFYTLF 737
Fly 738 RNQGRFVKEEVKPHPVLSRLFRASRQQTLTFDSNLVPMLCPPQPWSTPHNGGYLLNKTELIRLPH 802
Fly 803 QAIQQWDRIMASNPQHLYPALDSLNQLASVPWRVNTQLLDVIIKVFQNGGDVKLDVPQPPSSLPP 867
Fly 868 LPTLPAKDAEGNATSSEDRAKQFRDKLGHRRKQAEMYSLWCDALYRLSLAQHYRDKVFWLPHNMD 932
Fly 933 FRGRVYPVPPHLNHLGSDLARSMLIFDQAQPLGVDGLSWLKLHCINLTGLKKRDSVRERLLYAEE 997
Fly 998 IMPDILDSADNPLTGRMWWSKSDEPWQTLACCMEIANVHRCPDPAAYLSRFPIHQDGSCNGLQHY 1062
Fly 1063 AALGRDEAGARSVNLAPSAIPQDVYSAVAALVEKSRKADAQNGLHVAEALAGFVRRKVIKQTVMT 1127
Fly 1128 TVYGVTRYGARLQIARQLKDIDDFPKDWVWPASTYLTTKTFESLREMFTSTREIQDWFTECARLI 1192
Fly 1193 SGVCSQNVEWVTPLGLPVVQPYNRQEMKHSPRSGFKVSANMPMDLYERPNILKQKNAFPPNFIHS 1257
Fly 1258 LDSSHMMLTSLHCERQGITFVSVHDCFWTHANTVPELNRMCREQFVALHSQPILEQLSEFMRHTY 1322
Fly 1323 -SFKDSDFINDGSVEDLSKRQLNRILKQMPQKGDFDLRNVLDSVYFFS 1369 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| mtRNApol | NP_001259853.1 | RPO41 | 286..1369 | CDD:227439 | 467/1097 (43%) |
| PPR repeat | 314..342 | CDD:276811 | 9/27 (33%) | ||
| PPR repeat | 355..384 | CDD:276811 | 10/28 (36%) | ||
| PPR | 358..386 | CDD:279828 | 10/27 (37%) | ||
| RPOL_N | 513..829 | CDD:291372 | 99/322 (31%) | ||
| RNA_pol | 962..1368 | CDD:279308 | 246/406 (61%) | ||
| polrmt | XP_004910992.2 | RPO41 | 221..1234 | CDD:227439 | 463/1063 (44%) |
| PPR repeat | 256..285 | CDD:276811 | 10/28 (36%) | ||
| PPR repeat | 291..321 | CDD:276811 | 9/32 (28%) | ||
| RNA_pol | 830..1233 | CDD:395752 | 246/406 (61%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 511 | 1.000 | Domainoid score | I323 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 1 | 1.000 | - | - | H37996 | |
| Inparanoid | 1 | 1.050 | 871 | 1.000 | Inparanoid score | I409 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D135329at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0003398 | |
| OrthoInspector | 1 | 1.000 | - | - | oto105581 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR10102 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1209 |
| SonicParanoid | 1 | 1.000 | - | - | X2294 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 9 | 9.190 | |||||