DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4629 and SKS1

DIOPT Version :9

Sequence 1:NP_608564.3 Gene:CG4629 / 33284 FlyBaseID:FBgn0031299 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_015299.1 Gene:SKS1 / 856081 SGDID:S000005947 Length:502 Species:Saccharomyces cerevisiae


Alignment Length:566 Identity:119/566 - (21%)
Similarity:195/566 - (34%) Gaps:173/566 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 YRFCGDIGRGNFSKVKLAVHQLTRDKVAIKVV----DLD----RAGL------------------ 104
            :|....||.|.:..|...|..||..:.|:|.|    .:|    :.||                  
Yeast    10 FRITAQIGSGAYGLVFHVVDILTSREYAVKTVFKSSSMDEFYNKNGLNNNSQVARTTLLQTQLYH 74

  Fly   105 --------------DAKALRMLSS----------EIA-TLECVHHPNILRLFEVVETLGRVYLVT 144
                          |..::..|:.          ||| .|....|.||:::.:|:|:....::|.
Yeast    75 FFKSFQKKLFLPSVDLDSILQLTENELNRLPHYREIAFQLRVQSHGNIVKIHQVLESSIATFIVM 139

  Fly   145 EWIRGGELYNHITQGGPLREIHAAPLLK----QLLLAVKHMHSLGYVHRDIKAENVLLLSEDRLK 205
            ::. ..:|:..|......  ::...|:|    ||..|:.|.|.||..|.|||.|||||...|...
Yeast   140 DYY-DRDLFTSIVDDKHF--VNHGILIKKVFLQLCSALDHCHRLGIYHCDIKPENVLLDRNDNAY 201

  Fly   206 LADFGFSTQLINGANQKLDTFC-GSPPYAAPE------------LFSDDHYIGAPV---DVWALG 254
            |.|||.||:    :.......| ||..|.|||            :..|:.....|.   |:|:||
Yeast   202 LCDFGLSTK----SKYLAPNVCVGSSYYMAPERILYCLNTTTNGIHVDECCSSLPTDTGDIWSLG 262

  Fly   255 ILLYFMV-VGNMPFRAPTIPGLKA---------------AILKGDYLLPGQLSLPCIRLIQRILI 303
            |:|..:. :.|        |.|||               .:||  .:||  :|.....::.:||.
Yeast   263 IILINLTCIRN--------PWLKAHQKEDNTFQHFANDNNVLK--KILP--ISDELFTVLTKILQ 315

  Fly   304 HIPAQRPTIDDMLN-----SQFV------TCPKLSADLMQWEINQHTKPVKRSIFWVRSKSHRLR 357
            ..|..|..:..:::     :.|.      ..|.||:::....|      ::....::...||   
Yeast   316 LNPYTRIDMKTLMSEVSSLTSFTREGPLSQVPILSSEVYMTHI------IRNENLFLSDLSH--- 371

  Fly   358 KSASLRDRYAEVVKKPAISMNTRQQDEMFVQNFLQPIEMGHELLVPVSSQLKEPQSTEQAKRPTR 422
            .||....:..:..::..:....::|.:..:||               ..|.::.|..|.|     
Yeast   372 FSADQEQQQQQQQQQQQVQEQEQEQKQEQIQN---------------QEQAQQQQEEEDA----- 416

  Fly   423 RYMFCGSLKKKVTPMETEPEKQLANGGQSIGSAKINPWNVEVAEDCPLFKNYDAETGSCVMLP-- 485
                             |||..:.:...|.||       :|..|......|....|.|....|  
Yeast   417 -----------------EPESDIPSTYNSDGS-------MEKYEYTNNHNNSTFLTSSMDSTPYQ 457

  Fly   486 TNTEDLSQLGALEFEARQILAELGLTSEMLINARQSGPRSDIIGAY 531
            ::.:|:|.....:|:...:...| |..:|..:....||....:..|
Yeast   458 SDIDDVSASKDCKFQQDTLRNRL-LCLQMNFSTLTDGPNEKWLPDY 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4629NP_608564.3 STKc_NIM1 63..321 CDD:270977 82/346 (24%)
S_TKc 66..321 CDD:214567 82/346 (24%)
SKS1NP_015299.1 PKc_like 9..331 CDD:419665 82/339 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345325
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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