DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4629 and VHS1

DIOPT Version :9

Sequence 1:NP_608564.3 Gene:CG4629 / 33284 FlyBaseID:FBgn0031299 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_010533.1 Gene:VHS1 / 851834 SGDID:S000002655 Length:461 Species:Saccharomyces cerevisiae


Alignment Length:559 Identity:115/559 - (20%)
Similarity:183/559 - (32%) Gaps:208/559 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 RIGLYRFCGDIGRGNFSKVKLAVHQLTRDKVAIKVVDLDRAGLDAKA------------------ 108
            ||..|.....||.|.:..|..|:...|..:.|||.| :...|:..:|                  
Yeast     8 RINNYLITSQIGEGAYGLVYRALDIRTDRQYAIKAV-VQSYGVSKEADMGNDKIHKNSVKLQKKL 71

  Fly   109 ----------LRMLSSEIATLECV---------------------HHPNILRLFEVVETLGRVYL 142
                      :|:.|.::.::|.:                     ||.||:.:.||:::....::
Yeast    72 AKLFKESKNVVRVPSIDLESIENMSEEDFKKLPHYKEISLHLRVHHHKNIVTIHEVLQSAVCTFI 136

  Fly   143 VTEWIRGGELY------NHITQGGPLREIHAAPLLKQLLLAVKHMHSLGYVHRDIKAENVLLLSE 201
            |.::. ..:|:      .|....|.|    ...:..|:..|:.:.|..|..|.|||.||:||.:|
Yeast   137 VMDYY-PTDLFTSIVDNRHFVTNGLL----VKKVFLQICSALNYCHEHGIYHCDIKPENLLLDTE 196

  Fly   202 DRLKLADFGFSTQLINGANQKLDTFCGSPPYAAPELFSDD----------HYIGAPV-----DVW 251
            |.:.|.|||.||   .....|.:...||..|..||..|.|          |.:|...     |:|
Yeast   197 DNVFLCDFGLST---TSTYIKPNVCIGSSYYMPPERISFDGRVSSSKSGGHKLGKVCPSCNGDLW 258

  Fly   252 ALGILLYFMV-VGNMPFRAPTIPGLKA---------------AILKGDYLLPGQLSLPCIRLIQR 300
            :|||:|..:. :.|        |.|||               .|||  .:||  ||.....|:.:
Yeast   259 SLGIILINLTCIRN--------PWLKADKTEDNTYYYFTKDPNILK--QILP--LSDDFYSLLSK 311

  Fly   301 ILIHIPAQRPTIDDMLN-----SQFVTCPKLSADLMQWEINQHTKPVKRSIFWVRSKSHRLRKSA 360
            ||...|..|.::.:::.     :.|.....||          ...|:.:|::             
Yeast   312 ILQVNPKNRMSLQELMKEVSSITSFTNEGPLS----------KVPPLSKSVY------------- 353

  Fly   361 SLRDRYAEVVKKPAISMNTRQQDEMFVQNFLQPIEMGHELLVPVSSQLKEPQSTEQAKRPTRRYM 425
                                       :.|:.|::..:|.|.|.|..                ||
Yeast   354 ---------------------------EKFVSPVDNTNENLSPKSYV----------------YM 375

  Fly   426 FCGSLKKKVT-PMETEPEKQLANG-----GQSIGSAKINPWNVEVAEDCPLFKNYDAETG-SCVM 483
            ......|.:: ...:|.|..:..|     |...||                |...|.:|| ....
Yeast   376 HDSKAAKNLSYTSSSEEEDGIKEGIDDDNGSRSGS----------------FGTLDTDTGLHSSF 424

  Fly   484 LPTNTEDLSQLGALE-----FEARQILAELGLTSEMLIN 517
            ..|:.|..::...:.     ||.:  ..||.::|..|.|
Yeast   425 TSTSCESDNECSKISNKFSLFEKK--FNELRMSSSSLTN 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4629NP_608564.3 STKc_NIM1 63..321 CDD:270977 81/348 (23%)
S_TKc 66..321 CDD:214567 80/345 (23%)
VHS1NP_010533.1 STKc_Pat1_like 11..330 CDD:270895 80/339 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345324
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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