DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4629 and SnRK1.3

DIOPT Version :10

Sequence 1:NP_608564.3 Gene:CG4629 / 33284 FlyBaseID:FBgn0031299 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_198760.1 Gene:SnRK1.3 / 833940 AraportID:AT5G39440 Length:494 Species:Arabidopsis thaliana


Alignment Length:514 Identity:150/514 - (29%)
Similarity:246/514 - (47%) Gaps:87/514 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 EVTIGRRIGL---YRFCGDIGRGNFSKVKLAVHQLTRDKVAIKVVD---LDRAGLDAKALRMLSS 114
            |.|..:.:.:   ||....:|.|:|:|||||:|..|..|||||:::   :...|::.|..|    
plant     6 EKTTNKLVSILPNYRIGKTLGHGSFAKVKLALHVATGHKVAIKILNRSKIKNMGIEIKVQR---- 66

  Fly   115 EIATLECVHHPNILRLFEVVETLGRVYLVTEWIRGGELYNHITQGGPLREIHAAPLLKQLLLAVK 179
            ||..|..:.||:|:|.:||:||...:|:|.|:::.|||:::|.:.|.|:|..|..|.:|::..|:
plant    67 EIKILRFLMHPHIIRQYEVIETPNDIYVVMEYVKSGELFDYIVEKGKLQEDEARHLFQQIISGVE 131

  Fly   180 HMHSLGYVHRDIKAENVLLLSEDRLKLADFGFSTQLINGANQKLDTFCGSPPYAAPELFSDDHYI 244
            :.|....||||:|.|||||.|:..:|:.|||.|..:.:|  ..|.|.||||.|||||:.|...| 
plant   132 YCHRNMIVHRDLKPENVLLDSQCNIKIVDFGLSNVMHDG--HFLKTSCGSPNYAAPEVISGKPY- 193

  Fly   245 GAPVDVWALGILLYFMVVGNMPFRAPTIPGLKAAILKGDYLLPGQLSLPCIRLIQRILIHIPAQR 309
            |..||:|:.|::||.::.|.:||....||.:...|.:|.|.||..||.....||.|:|:..|..|
plant   194 GPDVDIWSCGVILYALLCGTLPFDDENIPNVFEKIKRGMYTLPNHLSHFARDLIPRMLMVDPTMR 258

  Fly   310 PTIDDM-----LNSQ---FVTCP---------KLSADLMQWEIN-----QHTKPVKRSIFWVRSK 352
            .:|.::     .|:.   :::.|         |:..:::|..:|     .|.         |.|.
plant   259 ISITEIRQHPWFNNHLPLYLSIPPLDTIDQAKKIEEEIIQNVVNIGFDRNHV---------VDSL 314

  Fly   353 SHRLRKSASL--------RDRYAEVVKKPAISMNTRQQDEMF-----VQNFLQPIEMGHELLVPV 404
            ::|::..|::        |::.: |...|..|......|.:|     |||....:......|..:
plant   315 ANRIQNEATVAYHLILDNRNQNS-VPNDPFQSKFKEISDGIFNSTLPVQNITSHVGHSFSALYGL 378

  Fly   405 SSQLKEPQSTEQAKRPTRRYMFCGSLKKKVTPME--TEPEKQLANGGQSIGSAKINPWNVEV--A 465
            .|.:|:.::            :...|:.:.:|.:  ||..|.|.|  ..|...||..:|::.  .
plant   379 KSNVKDDKT------------WTLGLQSQGSPYDIMTEIFKALQN--LKICWKKIGLYNIKCRWV 429

  Fly   466 EDCPLFKNYDAETGSCVMLPTNTEDLSQLGALEFEARQILAELGLTSEMLINARQSGPR 524
            .....:||:..|....::|||         .::||.:......|  ..:|...|..||:
plant   430 RSFAYYKNHTIEDECAIILPT---------VIKFEIQLYKVREG--KYLLDILRIDGPQ 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4629NP_608564.3 STKc_NIM1 63..321 CDD:270977 103/271 (38%)
SnRK1.3NP_198760.1 STKc_AMPK_alpha 16..270 CDD:270981 102/260 (39%)
UBA_SnRK1_plant 292..332 CDD:270520 7/48 (15%)
AMPKA_C 388..491 CDD:213378 24/103 (23%)

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