DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4629 and AMPKalpha

DIOPT Version :9

Sequence 1:NP_608564.3 Gene:CG4629 / 33284 FlyBaseID:FBgn0031299 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster


Alignment Length:542 Identity:141/542 - (26%)
Similarity:234/542 - (43%) Gaps:102/542 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 RIGLYRFCGDIGRGNFSKVKLAVHQLTRDKVAIKVVDLDR-AGLDAKALRMLSSEIATLECVHHP 125
            :||.|.....:|.|.|.|||:..||:||.|||:|:::..: ..||  .:..:..||..|:...||
  Fly    24 KIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLD--VVGKIRREIQNLKLFRHP 86

  Fly   126 NILRLFEVVETLGRVYLVTEWIRGGELYNHITQGGPLREIHAAPLLKQLLLAVKHMHSLGYVHRD 190
            :|::|::|:.|...::::.|::.||||:::|.:.|.|:|..|....:|::..|.:.|....||||
  Fly    87 HIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRD 151

  Fly   191 IKAENVLLLSEDRLKLADFGFSTQLINGANQKLDTFCGSPPYAAPELFSDDHYIGAPVDVWALGI 255
            :|.||:||.....:|:||||.|..:::|  :.|.|.||||.|||||:.|...|.|..||:|:.|:
  Fly   152 LKPENLLLDHNMHVKIADFGLSNMMLDG--EFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGV 214

  Fly   256 LLYFMVVGNMPFRAPTIPGLKAAILKGDYLLPGQLSLPCIRLIQRILIHIPAQRPTIDDMLNSQF 320
            :||.::.|.:||....:|.|...|..|.:.:|..|:...:.|:.::|...|.:|..|:::...::
  Fly   215 ILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEW 279

  Fly   321 VTCPKLSADLMQWEINQHTKPVKR-------SIFWVR-SKSHRLRKSASLRDRYAEVVKKPAISM 377
            .. ..|.|.|....|.|.:..:..       :.|.|: ::.|....|....|:.|  :....|..
  Fly   280 FQ-KDLPAYLFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQLA--IAYHLIID 341

  Fly   378 NTRQQDEMF-----VQNFL----------QPI---EMGHE---LLVPVSSQLKEPQSTEQAKRPT 421
            |.|..|:..     :.||.          .|:   .|.|:   ..|.|.........|.....|.
  Fly   342 NKRFADDAANQINEINNFFVAGSPPPPPPPPVPQSSMDHQAPLATVTVGGGTSASSGTATPVPPV 406

  Fly   422 RRYMFCGSLKKKVTPMETEPE-------KQLANGGQSIGSAKINPWNVEVAEDCPLFKNYDAETG 479
                 .|.......|:...||       :|||...|:.|..              .|....|..|
  Fly   407 -----AGGTPSSTIPIRPHPERIAPMRDRQLAMSVQTSGGG--------------AFPEKTARGG 452

  Fly   480 SCVMLPTNTEDLSQLGALEFEARQILAELGLTSEMLINARQSGPRSDIIGAYRI---------VV 535
            :.:                   ::....||:.|       ||.|...::..||.         ::
  Fly   453 TPI-------------------KRAKWHLGIRS-------QSKPNDIMLEVYRAMKALSYEWKII 491

  Fly   536 N----RLQKQSWLARKHVEMAL 553
            |    |:::|:....|..:|:|
  Fly   492 NPYHVRVRRQNVKTGKFSKMSL 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4629NP_608564.3 STKc_NIM1 63..321 CDD:270977 91/258 (35%)
S_TKc 66..321 CDD:214567 89/255 (35%)
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 91/258 (35%)
UBA_AID_AMPKalpha 297..360 CDD:270521 11/64 (17%)
AMPKA_C 457..580 CDD:213378 14/64 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461628
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24343
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.