DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4629 and snrkb

DIOPT Version :9

Sequence 1:NP_608564.3 Gene:CG4629 / 33284 FlyBaseID:FBgn0031299 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_957127.1 Gene:snrkb / 393806 ZFINID:ZDB-GENE-040426-1724 Length:741 Species:Danio rerio


Alignment Length:543 Identity:146/543 - (26%)
Similarity:229/543 - (42%) Gaps:93/543 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 RCGHEVTIGRRIGLYRFCGDIGRGNFSKVKLAVHQLTRDKVAIKVVDLDRAGLDAKALRMLSSEI 116
            :.|:|   |:..|||.....:|:|:|:.||||.|..|...||:||:  |:..||..|...|..|:
Zfish     5 KSGYE---GKIAGLYDLDRTLGKGHFAVVKLARHVFTGQLVAVKVI--DKTKLDDLATGHLLQEV 64

  Fly   117 ATLECVHHPNILRLFEVVETLGRVYLVTEWIRGGELYNHIT--QGGPLRE---IHAAPLLKQLLL 176
            ..::.|.|||::||:||::|..::||:.|...||::|::|.  :||...:   :|.|    |::.
Zfish    65 RCMKLVQHPNVVRLYEVIDTQTKLYLILELGDGGDMYDYILRHEGGVAEDTAKVHFA----QIVR 125

  Fly   177 AVKHMHSLGYVHRDIKAENVLLL-SEDRLKLADFGFSTQLINGANQKLDTFCGSPPYAAPELFSD 240
            |:.:.|.|..||||:|.|||:.. .:..:||.|||||.....|.  .|.|.|||..|:|||:...
Zfish   126 AIAYCHRLHVVHRDLKPENVVFFRQQGTVKLTDFGFSNHFKPGT--MLMTSCGSLAYSAPEILLG 188

  Fly   241 DHYIGAPVDVWALGILLYFMVVGNMPFRAPTIPGLKAAILKGDYLLPGQLSLPCIRLIQRILIHI 305
            :.|....||:|:||::||.:|.|:.||:..........|:...|.:|..:|..|..||.|:|...
Zfish   189 EEYDAPAVDIWSLGVILYMLVCGHPPFQETNDSETLIMIMDCRYTVPNHISAQCKDLISRMLQRD 253

  Fly   306 PAQRPTIDDMLNSQFVTCPKLSADLMQWEINQHTKPVKRSIFWVRSKSHRLRKSASLRDRYAEVV 370
            ||:|.::.::.:..::               |...|...........|||     ||.....|.:
Zfish   254 PAKRASLAEIESHPWL---------------QGVDPSPAGFTAAPLTSHR-----SLLPEEHEFI 298

  Fly   371 KKPAISMNTRQQDEMFVQNFLQPIE----------MGHELLVPVSSQLKEPQSTEQAKRPTRRYM 425
            .:...|.:...:|.  :|..|:...          :|..||.....|..........:||....:
Zfish   299 LQAMTSGSIAGRDA--IQEALEADRYNHITATYYLLGERLLRDKQEQSSLTPEQRNTQRPISEPL 361

  Fly   426 FCGSLKKKVTPMETEPEKQLANGGQSIGSAKINPWNVEVAED----CPLFKNYD------AETGS 480
            ...|...:...:...|...||    .:||.........|:|.    .|....:|      ..|..
Zfish   362 DLVSQVPRTDTLRGTPLSALA----PLGSLSTGYVRRGVSESGDLLAPKANRHDNSFSDFCSTAP 422

  Fly   481 CVM-----LPTNTEDLSQLGALEFEARQILAELGLTSEMLINARQSG----PRSDIIGAYRIVVN 536
            |:.     ||.:...:..||||:    ||..|.....|:.:......    |.:|          
Zfish   423 CLSLNMRPLPPDQPTVKSLGALQ----QICEEEEEEDEVKVKMAPGKLGPLPSTD---------- 473

  Fly   537 RLQKQSWLARKHVEMALHSEPKV 559
                   |:.|....:|.|||::
Zfish   474 -------LSLKPSRTSLQSEPQM 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4629NP_608564.3 STKc_NIM1 63..321 CDD:270977 95/263 (36%)
S_TKc 66..321 CDD:214567 93/260 (36%)
snrkbNP_957127.1 STKc_SNRK 12..269 CDD:270976 95/264 (36%)
S_TKc 16..269 CDD:214567 93/260 (36%)
UBA_SNRK 290..335 CDD:270524 7/46 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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