DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4629 and AMPKalpha

DIOPT Version :10

Sequence 1:NP_608564.3 Gene:CG4629 / 33284 FlyBaseID:FBgn0031299 Length:570 Species:Drosophila melanogaster
Sequence 2:XP_312237.4 Gene:AMPKalpha / 1273276 VectorBaseID:AGAMI1_005037 Length:565 Species:Anopheles gambiae


Alignment Length:538 Identity:142/538 - (26%)
Similarity:245/538 - (45%) Gaps:95/538 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 RIGLYRFCGDIGRGNFSKVKLAVHQLTRDKVAIKVVDLDR-AGLDAKALRMLSSEIATLECVHHP 125
            :||.|.....:|.|:|.|||:..||:|:.|||:|:::..: ..||  .:..:..||..|:...||
Mosquito    17 KIGHYILGATLGTGSFGKVKIGEHQVTKHKVAVKILNRQKIKSLD--VVGKIRREIQNLKLFRHP 79

  Fly   126 NILRLFEVVETLGRVYLVTEWIRGGELYNHITQGGPLREIHAAPLLKQLLLAVKHMHSLGYVHRD 190
            :|::|::|:.|...::::.|::.||||:::|.:.|.|:|..|....:|::..|.:.|....||||
Mosquito    80 HIIKLYQVISTPTDIFMIMEYVSGGELFDYIVKNGKLQESEARRFFQQIISGVDYCHRHMIVHRD 144

  Fly   191 IKAENVLLLSEDRLKLADFGFSTQLINGANQKLDTFCGSPPYAAPELFSDDHYIGAPVDVWALGI 255
            :|.||:||.....:|:||||.|..:::|  :.|.|.||||.|||||:.|...|.|..||:|:.|:
Mosquito   145 LKPENLLLDHNRHVKIADFGLSNMMLDG--EFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGV 207

  Fly   256 LLYFMVVGNMPFRAPTIPGLKAAILKGDYLLPGQLSLPCIRLIQRILIHIPAQRPTIDDMLNSQF 320
            :||.::.|.:||....:|.|...|..|.:.:|..|:...:.|:.::|...|.:|.|::::...::
Mosquito   208 ILYALLCGTLPFDDEHVPTLFRKIKSGVFPIPEYLNKQVVSLLCQMLQVDPLKRATVEEIKKHEW 272

  Fly   321 VTCPKLSADLMQWEINQHTKPV----------KRSIFWVRSKSHRLRKSASLRDRYAEV-VKKPA 374
            .. ..|.|.|....:.|.:..|          |.|:     |.|.:..:....|.:.:: :....
Mosquito   273 FQ-KDLPAYLFPSPVEQDSSVVDTNAIREVCEKFSV-----KEHEVHNALLSGDPHDQLAIAYHL 331

  Fly   375 ISMNTRQQDEMFVQNFLQPIEMGHELLVPVSSQLKE-------PQSTEQAKRPTRRYMFCGSLKK 432
            |..|.|..||                  ...::|||       |.....:|..|.  :..||:..
Mosquito   332 IIDNKRIADE------------------AAKAELKEFYVAGSPPPPGADSKFGTP--LGPGSIAP 376

  Fly   433 KVTPMETEPEKQLANGGQSIGSAKINPWNVEVAEDCPLFKNYDAETGSCVMLPTNTEDLSQLGAL 497
            ......:||.|..:...:.|...:..|  |..|::.|              :|| ...:|....:
Mosquito   377 TQAGTPSEPFKSPSIHPERIAPLRERP--VTAAQNMP--------------VPT-LSTMSPSAVM 424

  Fly   498 EFE------ARQILAELGLTSEMLINARQSGPRSDIIGAYRI---------VVN----RLQKQSW 543
            ..:      .::....||:.|       ||.|...::..||.         ::|    |::|.:.
Mosquito   425 PIDKHRGTPVKRAKWHLGIRS-------QSKPNDIMLEVYRAMKALDFEWKIINPYHVRVRKYNA 482

  Fly   544 LARKHVEMAL---HSEPK 558
            ...|||:|:|   ..:||
Mosquito   483 RNDKHVKMSLQLYQVDPK 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4629NP_608564.3 STKc_NIM1 63..321 CDD:270977 90/258 (35%)
AMPKalphaXP_312237.4 STKc_AMPK_alpha 18..273 CDD:270981 90/258 (35%)
UBA_AID_AMPKalpha 290..354 CDD:270521 14/86 (16%)
AMPKA_C 436..563 CDD:213378 18/72 (25%)

Return to query results.
Submit another query.