DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg4a and ATG4

DIOPT Version :10

Sequence 1:NP_608563.1 Gene:Atg4a / 33283 FlyBaseID:FBgn0031298 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_014176.2 Gene:ATG4 / 855498 SGDID:S000005167 Length:494 Species:Saccharomyces cerevisiae


Alignment Length:453 Identity:107/453 - (23%)
Similarity:177/453 - (39%) Gaps:116/453 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DQLARIMESVFE-------AYLGPDSVLASAV--------------------GQAVGSGEPEDIP 44
            |.:.::...|||       |.:..|.::...|                    |:||..|....: 
Yeast    11 DLVQKVSHGVFEGSSEEPAALMNHDYIVLGEVYPERDEESGAEQCEQDCRYRGEAVSDGFLSSL- 74

  Fly    45 RRNTDVWVLGKKYNAIQELELIRRDIQSRLWCTYRHGFSPLGEVQ-------------------- 89
                    .|::.::..:..|:  |:|||:..|||..|.|:....                    
Yeast    75 --------FGREISSYTKEFLL--DVQSRVNFTYRTRFVPIARAPDGPSPLSLNLLVRTNPISTI 129

  Fly    90 ---------LTTDKGWGCMLRCGQMVLAQALIDLHLGRDWFWTPDCRDATYLKIVNRFEDVRNSF 145
                     ..||.|||||:|.||.:|..||..||||||:....:.......|.||.|.|...:.
Yeast   130 EDYIANPDCFNTDIGWGCMIRTGQSLLGNALQILHLGRDFRVNGNESLERESKFVNWFNDTPEAP 194

  Fly   146 YSIHQIAQMG-ESQNKAVGEWLGPNTVAQILKKLV-RFDDWSSLAIHVAMDSTVVLDDVYASCRE 208
            :|:|.....| |..:|..|||.||...|:.::.|: .|.:..             :||...|...
Yeast   195 FSLHNFVSAGTELSDKRPGEWFGPAATARSIQSLIYGFPECG-------------IDDCIVSVSS 246

  Fly   209 GGSWK-------------PLLLIIPLRLGITDINPLYVPALKRCLELDSSCGMIGGRPNQALYFL 260
            |..::             .:|.::.::|||..:|..|..::...|....|.|:.||||:.:|||.
Yeast   247 GDIYENEVEKVFAENPNSRILFLLGVKLGINAVNESYRESICGILSSTQSVGIAGGRPSSSLYFF 311

  Fly   261 GYVDDEVLYLDPHTTQRTGAVAQKTAAAEQDYDETYHQKHAARLNFSAMDPSLAVCFLCKTSDSF 325
            ||..:|.|:.|||..|         .|.|..:.|:.|.....:|..|.||||:.:..|.|....:
Yeast   312 GYQGNEFLHFDPHIPQ---------PAVEDSFVESCHTSKFGKLQLSEMDPSMLIGILIKGEKDW 367

  Fly   326 ESLLTKLKEEVLSLCSPALFEISQTRAVDWDTT---EDIDWPTMPDIDWPAGTSDSDSFAIVE 385
            :       :..|.:...|:..:...|..|:|.:   :|::  ::.........|::::..::|
Yeast   368 Q-------QWKLEVAESAIINVLAKRMDDFDVSCSMDDVE--SVSSNSMKKDASNNENLGVLE 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg4aNP_608563.1 Peptidase_C54 63..328 CDD:460915 87/308 (28%)
ATG4NP_014176.2 Peptidase_C54 84..371 CDD:460915 87/317 (27%)

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