DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg4a and ATG4D

DIOPT Version :9

Sequence 1:NP_608563.1 Gene:Atg4a / 33283 FlyBaseID:FBgn0031298 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_116274.3 Gene:ATG4D / 84971 HGNCID:20789 Length:474 Species:Homo sapiens


Alignment Length:421 Identity:133/421 - (31%)
Similarity:200/421 - (47%) Gaps:82/421 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LGPDSVLASAVGQ-AVGSGEPEDIPRRNTDV----------WVL---------------GKKYNA 59
            |||......|:|. ..|..||:::.:.....          ||:               |::|..
Human    39 LGPSGASGPALGSPGAGPSEPDEVDKFKAKFLTAWNNVKYGWVVKSRTSFSKISSIHLCGRRYRF 103

  Fly    60 IQE--LELIRRDIQSRLWCTYRHGFSPLGEVQLTTDKGWGCMLRCGQMVLAQALIDLHLGRDWFW 122
            ..|  ::..:||..||||.|||..|.||....||:|.|||||||.|||:|||.|:...|.|||.|
Human   104 EGEGDIQRFQRDFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTW 168

  Fly   123 ----------------------------------TPDC-RDATYLKIVNRFEDVRNSFYSIHQIA 152
                                              .|:. ::..:.:||:.|.|...:.:.:|::.
Human   169 AEGMGLGPPELSGSASPSRYHGPARWMPPRWAQGAPELEQERRHRQIVSWFADHPRAPFGLHRLV 233

  Fly   153 QMGESQNKAVGEWLGPNTVAQILKKLVR-FDDWSSLAIHVAMDSTVVLDDV---YASCREGGSWK 213
            ::|:|..|..|:|.||:.||.||:|.|. ..|.:.|.::|:.|.||...||   .|.......||
Human   234 ELGQSSGKKAGDWYGPSLVAHILRKAVESCSDVTRLVVYVSQDCTVYKADVARLVARPDPTAEWK 298

  Fly   214 PLLLIIPLRLGITDINPLYVPALKRCLELDSSCGMIGGRPNQALYFLGYVDDEVLYLDPHTTQRT 278
            .:::::|:|||...:||:|||.:|..|..:...|::||:|..:|||:||.||.:||||||..|.|
Human   299 SVVILVPVRLGGETLNPVYVPCVKELLRCELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQPT 363

  Fly   279 GAVAQKTAAAEQDYD-ETYHQKHAARLNFSAMDPSLAVCFLCKTSDSFESLLTKLKEEVLSLCSP 342
            ..|:|      .|:. |::|.....::.|:.||||..|.|.......||:|.::| ..|||..|.
Human   364 VDVSQ------ADFPLESFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSEL-TRVLSSSSA 421

  Fly   343 A----LFEISQTRAVDW---DTTEDIDWPTM 366
            .    :|.:::..|.|.   |....:..||:
Human   422 TERYPMFTLAEGHAQDHSLDDLCSQLAQPTL 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg4aNP_608563.1 Peptidase_C54 66..328 CDD:281417 108/301 (36%)
ATG4DNP_116274.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..60 7/20 (35%)
Cryptic mitochondrial signal peptide 64..103 4/38 (11%)
Peptidase_C54 110..411 CDD:281417 109/306 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2674
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55011
OrthoDB 1 1.010 - - D332531at33208
OrthoFinder 1 1.000 - - FOG0000466
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100501
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R109
SonicParanoid 1 1.000 - - X289
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.760

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