DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg4a and AT2G44140

DIOPT Version :9

Sequence 1:NP_608563.1 Gene:Atg4a / 33283 FlyBaseID:FBgn0031298 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001324765.1 Gene:AT2G44140 / 819020 AraportID:AT2G44140 Length:467 Species:Arabidopsis thaliana


Alignment Length:405 Identity:121/405 - (29%)
Similarity:183/405 - (45%) Gaps:73/405 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SDQLARIMESVFEAYLGPDSVLASAVGQAVGSGEPEDIPRRNTDVWVLGKKYNAIQE-------- 62
            |..:.|..|.|    |||:..               .:|...:|||:||..|....:        
plant    86 SGAIRRFQERV----LGPNRT---------------GLPSTTSDVWLLGVCYKISADENSGETDT 131

  Fly    63 ---LELIRRDIQSRLWCTYRHGFSPLGEVQLTTDKGWGCMLRCGQMVLAQALIDLHLGRDWFWTP 124
               |..::.|..|::..|||.||.|..:...|:|..||||:|..||:.||||:...|||.|....
plant   132 GTVLAALQLDFSSKILMTYRKGFEPFRDTTYTSDVNWGCMIRSSQMLFAQALLFHRLGRAWTKKS 196

  Fly   125 DCRDATYLKIVNRFEDVRNSFYSIHQIAQMGESQNKAVGEWLGPNTVAQ-----ILKKLVRFDDW 184
            :..:..||:.:..|.|...|.:|||.:...|.|...|.|.|:||..:.:     ..||..:.|..
plant   197 ELPEQEYLETLEPFGDSEPSAFSIHNLIIAGASYGLAAGSWVGPYAICRAWESLACKKRKQTDSK 261

  Fly   185 SS---LAIHVAMDS---------TVVLDDVYASCRE---GGS-WKPLLLIIPLRLGITDINPLYV 233
            :.   :|:|:...|         .:.::|...||.|   |.| |.|::|::||.||:..:||.|:
plant   262 NQTLPMAVHIVSGSEDGERGGAPILCIEDATKSCLEFSKGQSEWTPIILLVPLVLGLDSVNPRYI 326

  Fly   234 PALKRCLELDSSCGMIGGRPNQALYFLGYVDDEVLYLDPHTTQRTGAVAQKTAAAEQDYD-ETYH 297
            |:|........|.|::||:|..:.|.:|..:|:..|||||..|:...|.::|    .|.| .:||
plant   327 PSLVATFTFPQSVGILGGKPGASTYIVGVQEDKGFYLDPHEVQQVVTVNKET----PDVDTSSYH 387

  Fly   298 QKHAARLNFSAMDPSLAVCFLCKTSDSFESL---LTKLKEEVLSLCSPALFEISQTRAV------ 353
            ......:...::|||||:.|.|:..|.|:..   ..||.||  |..:| ||.::||...      
plant   388 CNVLRYVPLESLDPSLALGFYCRDKDDFDDFCLRALKLAEE--SNGAP-LFTVTQTHTAINQSNY 449

  Fly   354 -----DWDTTEDIDW 363
                 |.:...:.||
plant   450 GFADDDSEDEREDDW 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg4aNP_608563.1 Peptidase_C54 66..328 CDD:281417 93/283 (33%)
AT2G44140NP_001324765.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2674
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H70873
Inparanoid 1 1.050 181 1.000 Inparanoid score I1452
OMA 1 1.010 - - QHG55011
OrthoDB 1 1.010 - - D431748at2759
OrthoFinder 1 1.000 - - FOG0000466
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100501
Panther 1 1.100 - - O PTHR22624
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X289
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.840

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