DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg4a and atg4da

DIOPT Version :9

Sequence 1:NP_608563.1 Gene:Atg4a / 33283 FlyBaseID:FBgn0031298 Length:411 Species:Drosophila melanogaster
Sequence 2:XP_009292711.1 Gene:atg4da / 795933 ZFINID:ZDB-GENE-041111-102 Length:485 Species:Danio rerio


Alignment Length:416 Identity:127/416 - (30%)
Similarity:194/416 - (46%) Gaps:111/416 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YLG----PDSVLASAVGQAVGSGEPEDIPR-------------------------RNTDVWVLGK 55
            :||    ||       |...|||||:::.|                         :::.:.:||:
Zfish    29 HLGHGAVPD-------GIREGSGEPDEVDRLKAKFMSAWNNVKYGWTVKSKTSFNKSSPLILLGQ 86

  Fly    56 K--YNAIQELELIRRDIQSRLWCTYRHGFSPLGEVQLTTDKGWGCMLRCGQMVLAQALIDLHL-G 117
            .  :|...|:|..|:...|.:|.|||..|..|....||||.|||||||.|||:|||.|: ||| .
Zfish    87 SFLFNNEDEVERFRQTFVSCVWLTYRREFPQLDGSSLTTDCGWGCMLRSGQMMLAQGLL-LHLMP 150

  Fly   118 RDWFWTPDCR------------------------------------------------------- 127
            .||.|: ||.                                                       
Zfish   151 TDWRWS-DCHALTDVDFEVLKPRSPSRPAGMSMPSFSSSWSSSIPQINPSPGITEAHRRAPARCP 214

  Fly   128 --------DATYLKIVNRFEDVRNSFYSIHQIAQMGESQNKAVGEWLGPNTVAQILKKLV-RFDD 183
                    ||.:.|:|:.|.|..::.:.:||:.::|:...|..|:|.||:.||.:|:|.| |..:
Zfish   215 SASPDPQVDALHRKVVSCFGDHPSAPFGVHQLVELGKESGKRAGDWYGPSVVAHMLRKAVARAAE 279

  Fly   184 WSSLAIHVAMDSTVVLDDVYASCREGG-SWKPLLLIIPLRLGITDINPLYVPALKRCLELDSSCG 247
            :..||::||.|.||..:||.:.|...| .||.:::::|:|||...:||.|:..:|..|:|....|
Zfish   280 FEDLAVYVAQDCTVYKEDVMSLCESSGVGWKSVVILVPVRLGGESLNPSYIECVKNILKLKCCIG 344

  Fly   248 MIGGRPNQALYFLGYVDDEVLYLDPHTTQRTGAVAQKTAAAEQDYDETYHQKHAARLNFSAMDPS 312
            :|||:|..:|:|:|:.|:::||||||..|....|.|...:.     |::|.....::|||.||||
Zfish   345 IIGGKPKHSLFFVGFQDEQLLYLDPHYCQPVVDVTQANFSL-----ESFHCNSPRKMNFSRMDPS 404

  Fly   313 LAVCFLCKTSDSFESLLTKLKEEVLS 338
            ..:....::...||||.|.:.|.:.|
Zfish   405 CTIGLYARSKTDFESLCTAVSEALSS 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg4aNP_608563.1 Peptidase_C54 66..328 CDD:281417 106/327 (32%)
atg4daXP_009292711.1 Peptidase_C54 97..422 CDD:308812 109/331 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2674
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55011
OrthoDB 1 1.010 - - D332531at33208
OrthoFinder 1 1.000 - - FOG0000466
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100501
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R109
SonicParanoid 1 1.000 - - X289
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.760

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