Protein Alignment Atg4a and atg4b

DIOPT Version :10

• Sequence 1: NP_608563.1
• Gene: Atg4a / 33283
• FlyBaseID: FBgn0031298
• Length: 411
• Species: Drosophila melanogaster
• Sequence 2: XP_012826005.1
• Gene: atg4b / 779919
• XenbaseID: XB-GENE-967111
• Length: 401
• Species: Xenopus tropicalis
• Alignment Length: 335
• Identity: 159/335 - (47%)
• Similarity: 209/335 - (62%)
• Gaps: 39/335 - (11%)

  Fly    42 DIPRRNTDVWVLGKKYNAIQELELIRRDIQSRLWCTYRHGFSPLGEVQLTTDKGWGCMLRCGQMV 106
            |.|.....|||||:||:|:.|.|.:..||.||||.|||..|..:|....|:|.|||||||||||:
 Frog    35 DFPETAEPVWVLGRKYSALTEKEQLLNDITSRLWFTYRRNFPAIGGTGPTSDTGWGCMLRCGQMI 99

  Fly   107 LAQALIDLHLGRDWFWTPDCRDATYLKIVNRFEDVRNSFYSIHQIAQMGESQNKAVGEWLGPNTV 171
            .||||:..|:||||.|........||.|:..|.|.::|:||||||||||..:.|.:|:|.|||||
 Frog   100 FAQALLCRHIGRDWRWDKQKSQGEYLNILTAFLDKKDSYYSIHQIAQMGVGEGKCIGQWYGPNTV 164

  Fly   172 AQILKKLVRFDDWSSLAIHVAMDSTVVLDDVYASCREGGS----------------------WKP 214
            ||:|:||..||.|||:|:|:|||:|||:|::...||.|.:                      |||
 Frog   165 AQVLRKLAVFDQWSSIAVHIAMDNTVVMDEIRRLCRAGTNESSEAGALCNGYTGVSDPSCSLWKP 229

  Fly   215 LLLIIPLRLGITDINPLYVPALKRCLELDSSCGMIGGRPNQALYFLGYVDDEVLYLDPHTTQRTG 279
            |:|:||||||::|||..|:..||.|..:..|.|:||||||.|.||:|||.||::||||||||
 Frog   230 LVLLIPLRLGLSDINEAYIETLKHCFMVPQSLGVIGGRPNSAHYFIGYVGDELIYLDPHTTQ--- 291

  Fly   280 AVAQKTAAAEQD----YDETYHQKH-AARLNFSAMDPSLAVCFLCKTSDSFESLLTKLKEEVLSL 339
                 .|....|    .||::|.:| ..|::.|.:|||:||.|.|::.:.||....::|:  |||
 Frog   292 -----LAVEPSDCCFVEDESFHCQHPPCRMHVSEIDPSIAVGFFCRSQEDFEDWCQQIKK--LSL 349

  Fly   340 CSPAL--FEI 347
            ...||  ||:
 Frog   350 SGGALPMFEV 359

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Atg4a	NP_608563.1	Peptidase_C54	63..328	CDD:460915	140/291 (48%)
atg4b	XP_012826005.1	Peptidase_C54	56..343	CDD:460915	140/294 (48%)
		ATG4_LIR	371..399	CDD:466317