DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg4a and Atg4a

DIOPT Version :10

Sequence 1:NP_608563.1 Gene:Atg4a / 33283 FlyBaseID:FBgn0031298 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001366610.1 Gene:Atg4a / 666468 MGIID:2147903 Length:463 Species:Mus musculus


Alignment Length:411 Identity:158/411 - (38%)
Similarity:234/411 - (56%) Gaps:59/411 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 MESVFEAY-----LGPDSVLASAVGQAVGSGEPEDIPRRNTDVWVLGKKYNAIQELELIRRDIQS 72
            ||||...|     :.||.:              |:.|..:..||:|||::....|...:..||.:
Mouse    68 MESVMSKYENQILIFPDYL--------------EEFPDTDELVWILGKQHPLKTEKSKLLSDISA 118

  Fly    73 RLWCTYRHGFSPLGEVQLTTDKGWGCMLRCGQMVLAQALIDLHLGRDWFWTPDC-RDATYLKIVN 136
            |||.|||..|||:|....::|.|||||||||||:||||||..||||||.|.... :...|.:|:.
Mouse   119 RLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWERQKEQPKEYQRILQ 183

  Fly   137 RFEDVRNSFYSIHQIAQMGESQNKAVGEWLGPNTVAQILKKLVRFDDWSSLAIHVAMDSTVVLDD 201
            .|.|.::..|||||:||||..:.|::|||.|||||||::|||..||:|:|||::|:||:|||::|
Mouse   184 CFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVIKKLALFDEWNSLAVYVSMDNTVVIED 248

  Fly   202 VYASC---------------------REG----GSWKPLLLIIPLRLGITDINPLYVPALKRCLE 241
            :...|                     |:.    .:|||||||:||||||..|||:||.|.|.|.:
Mouse   249 IKKMCCVLPVGAADPAGDFLTASNQSRDTSVPCSAWKPLLLIVPLRLGINQINPVYVEAFKECFK 313

  Fly   242 LDSSCGMIGGRPNQALYFLGYVDDEVLYLDPHTTQRTGAVAQKTAAAEQDYDETYH-QKHAARLN 305
            :..|.|.:||:||.|.||:|::.||:::||||||| |....:::...:   |:|:| .:...|::
Mouse   314 MPQSLGALGGKPNNAYYFIGFLGDELIFLDPHTTQ-TFVDIEESGLVD---DQTFHCLQSPQRMS 374

  Fly   306 FSAMDPSLAVCFLCKTSDSFESLLTKLKEEVLSLCSPALFEISQTRAVDWDTTEDIDWPTMPDI- 369
            ...:|||:|:.|.||....|::..:.:::|:|.. :..:||:.|.....|.....   |..|:: 
Mouse   375 ILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKE-NLRMFELVQKHPSHWPPFVP---PAKPEVT 435

  Fly   370 ----DWPAGTSDSDSFAIVEE 386
                ::...|...:.|.:.|:
Mouse   436 TTGAEFIESTEQLEDFELEED 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg4aNP_608563.1 Peptidase_C54 63..328 CDD:460915 132/291 (45%)
Atg4aNP_001366610.1 Peptidase_C54 109..399 CDD:460915 137/316 (43%)

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