DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg4a and Atg4a

DIOPT Version :9

Sequence 1:NP_608563.1 Gene:Atg4a / 33283 FlyBaseID:FBgn0031298 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001366610.1 Gene:Atg4a / 666468 MGIID:2147903 Length:463 Species:Mus musculus


Alignment Length:411 Identity:158/411 - (38%)
Similarity:234/411 - (56%) Gaps:59/411 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 MESVFEAY-----LGPDSVLASAVGQAVGSGEPEDIPRRNTDVWVLGKKYNAIQELELIRRDIQS 72
            ||||...|     :.||.:              |:.|..:..||:|||::....|...:..||.:
Mouse    68 MESVMSKYENQILIFPDYL--------------EEFPDTDELVWILGKQHPLKTEKSKLLSDISA 118

  Fly    73 RLWCTYRHGFSPLGEVQLTTDKGWGCMLRCGQMVLAQALIDLHLGRDWFWTPDC-RDATYLKIVN 136
            |||.|||..|||:|....::|.|||||||||||:||||||..||||||.|.... :...|.:|:.
Mouse   119 RLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWERQKEQPKEYQRILQ 183

  Fly   137 RFEDVRNSFYSIHQIAQMGESQNKAVGEWLGPNTVAQILKKLVRFDDWSSLAIHVAMDSTVVLDD 201
            .|.|.::..|||||:||||..:.|::|||.|||||||::|||..||:|:|||::|:||:|||::|
Mouse   184 CFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVIKKLALFDEWNSLAVYVSMDNTVVIED 248

  Fly   202 VYASC---------------------REG----GSWKPLLLIIPLRLGITDINPLYVPALKRCLE 241
            :...|                     |:.    .:|||||||:||||||..|||:||.|.|.|.:
Mouse   249 IKKMCCVLPVGAADPAGDFLTASNQSRDTSVPCSAWKPLLLIVPLRLGINQINPVYVEAFKECFK 313

  Fly   242 LDSSCGMIGGRPNQALYFLGYVDDEVLYLDPHTTQRTGAVAQKTAAAEQDYDETYH-QKHAARLN 305
            :..|.|.:||:||.|.||:|::.||:::||||||| |....:::...:   |:|:| .:...|::
Mouse   314 MPQSLGALGGKPNNAYYFIGFLGDELIFLDPHTTQ-TFVDIEESGLVD---DQTFHCLQSPQRMS 374

  Fly   306 FSAMDPSLAVCFLCKTSDSFESLLTKLKEEVLSLCSPALFEISQTRAVDWDTTEDIDWPTMPDI- 369
            ...:|||:|:.|.||....|::..:.:::|:|.. :..:||:.|.....|.....   |..|:: 
Mouse   375 ILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKE-NLRMFELVQKHPSHWPPFVP---PAKPEVT 435

  Fly   370 ----DWPAGTSDSDSFAIVEE 386
                ::...|...:.|.:.|:
Mouse   436 TTGAEFIESTEQLEDFELEED 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg4aNP_608563.1 Peptidase_C54 66..328 CDD:281417 132/288 (46%)
Atg4aNP_001366610.1 Peptidase_C54 109..399 CDD:397471 137/316 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837617
Domainoid 1 1.000 279 1.000 Domainoid score I1680
eggNOG 1 0.900 - - E1_KOG2674
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H70873
Inparanoid 1 1.050 304 1.000 Inparanoid score I2629
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55011
OrthoDB 1 1.010 - - D332531at33208
OrthoFinder 1 1.000 - - FOG0000466
OrthoInspector 1 1.000 - - otm43676
orthoMCL 1 0.900 - - OOG6_100501
Panther 1 1.100 - - O PTHR22624
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R109
SonicParanoid 1 1.000 - - X289
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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