DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg4a and Atg4a

DIOPT Version :10

Sequence 1:NP_608563.1 Gene:Atg4a / 33283 FlyBaseID:FBgn0031298 Length:411 Species:Drosophila melanogaster
Sequence 2:XP_316946.5 Gene:Atg4a / 1277474 VectorBaseID:AGAMI1_003896 Length:387 Species:Anopheles gambiae


Alignment Length:347 Identity:203/347 - (58%)
Similarity:259/347 - (74%) Gaps:13/347 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VFEAYLGPDSVLASAVGQAVGSGEPEDIPRRNTDVWVLGKKYNAIQELELIRRDIQSRLWCTYRH 80
            :.:||:|.|..:|:         ||:|||:.|..||:|||:|||..:||.||:|:|||||||||.
Mosquito     1 MLDAYVGYDLSIAT---------EPDDIPKTNDTVWILGKQYNASDDLEAIRQDVQSRLWCTYRR 56

  Fly    81 GFSPLGEVQLTTDKGWGCMLRCGQMVLAQALIDLHLGRDWFWTPDCRDATYLKIVNRFEDVRNSF 145
            ||.|:|..|||||||||||||||||||||||:.|||||||.|..:.||..||.|||||||.:.:.
Mosquito    57 GFVPIGNTQLTTDKGWGCMLRCGQMVLAQALLQLHLGRDWVWEAETRDDIYLNIVNRFEDSKQAP 121

  Fly   146 YSIHQIAQMGE-SQNKAVGEWLGPNTVAQILKKLVRFDDWSSLAIHVAMDSTVVLDDVYASC--- 206
            :|:||||.||: |:.|.:|||.|||||||:|||||:||||..|.||||:|:||..|::...|   
Mosquito   122 FSLHQIALMGDSSEEKRIGEWFGPNTVAQVLKKLVKFDDWCRLVIHVALDNTVATDEIVELCVDK 186

  Fly   207 REGGSWKPLLLIIPLRLGITDINPLYVPALKRCLELDSSCGMIGGRPNQALYFLGYVDDEVLYLD 271
            :|..:|||||||||||||::::||:|:..||:|.:|..|||||||||||||||:|||..|.||||
Mosquito   187 KEPEAWKPLLLIIPLRLGLSEVNPIYIEGLKKCFQLPGSCGMIGGRPNQALYFIGYVGGEALYLD 251

  Fly   272 PHTTQRTGAVAQKTAAAEQDYDETYHQKHAARLNFSAMDPSLAVCFLCKTSDSFESLLTKLKEEV 336
            |||.||.|.|..|...|||:.|||:||::|:|::|::|||||||||||.:...|:.|:.:..:.|
Mosquito   252 PHTVQRVGTVGSKQDPAEQELDETFHQRYASRISFTSMDPSLAVCFLCVSRQQFDQLVARFNDSV 316

  Fly   337 LSLCSPALFEISQTRAVDWDTT 358
            ....|.||||:::||...|..|
Mosquito   317 NGGTSQALFEVTKTRQAPWTPT 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg4aNP_608563.1 Peptidase_C54 63..328 CDD:460915 173/268 (65%)
Atg4aXP_316946.5 None

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