DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg4a and LOC101884161

DIOPT Version :9

Sequence 1:NP_608563.1 Gene:Atg4a / 33283 FlyBaseID:FBgn0031298 Length:411 Species:Drosophila melanogaster
Sequence 2:XP_017209984.1 Gene:LOC101884161 / 101884161 -ID:- Length:460 Species:Danio rerio


Alignment Length:347 Identity:117/347 - (33%)
Similarity:178/347 - (51%) Gaps:60/347 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 PR--RNTDVWVLGKKY--NAIQELELIRRDIQSRLWCTYRHGFSPLGEVQLTTDKGWGCMLRCGQ 104
            ||  :::.|.:||:.|  ::....|..||...|.||.:||.||.||....|::|.|||||||..|
Zfish    71 PRLSKSSPVCLLGQSYQLSSTGVRESFRRVFSSLLWMSYRRGFRPLDGSTLSSDAGWGCMLRSAQ 135

  Fly   105 MVLAQALIDLH-LGRDWFW------TPD-------------------C-----------RDATYL 132
            |:|||.|: || :...|.|      |.|                   |           .:.::.
Zfish   136 MLLAQGLL-LHIMPNGWTWPATHNQTKDDLEVLDAHGSLRHSGKSRRCSLGSALDGESHEERSHR 199

  Fly   133 KIVNRFEDVRNSFYSIHQIAQMGESQNKAVGEWLGPNTVAQILKKLVRFDDWSSLAIHVAMDSTV 197
            :||:.|.|:.::.:.:|::.::|.:..|..|:|.||...|.||:|.|...:.|.|.::||.|.||
Zfish   200 RIVSWFGDLPSAPFGLHRLVELGRAFGKRAGDWYGPAIAAHILQKAVSASELSDLVVYVAQDCTV 264

  Fly   198 VLDDVY---------ASCREGGSWKPLLLIIPLRLGITDINPLYVPALKRCLELDSSCGMIGGRP 253
            ...||.         ||.|....||.|:|::|:|||...:||:|...:||.|||....|:|||:|
Zfish   265 YTGDVLNLCRTSRTDASWRSTSGWKSLVLLVPVRLGSDGLNPVYTGCVKRLLELRCCLGIIGGKP 329

  Fly   254 NQALYFLGYVDDEVLYLDPHTTQRTGAVAQKTAAAEQDYD--ETYHQKHAARLNFSAMDPSLAVC 316
            ..:|||:|:.:|:::|||||       ..|.....:||:.  |::|.|...::.||.||||..|.
Zfish   330 KHSLYFVGFQNDQLIYLDPH-------YCQSAVDVQQDHFPLESFHCKTVRKMAFSRMDPSCTVG 387

  Fly   317 FLCKTSDSFESLLTKLKEEVLS 338
            |..::...|.||.:.:.:.:.|
Zfish   388 FYARSRADFHSLCSDVSKALSS 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg4aNP_608563.1 Peptidase_C54 66..328 CDD:281417 107/309 (35%)
LOC101884161XP_017209984.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D332531at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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