DRSC/TRiP Functional Genomics Resources

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Protein Alignment gNacalpha and icd-2

DIOPT Version :10

Sequence 1:NP_608561.2 Gene:gNacalpha / 33279 FlyBaseID:FBgn0031296 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_490749.1 Gene:icd-2 / 171646 WormBaseID:WBGene00022042 Length:195 Species:Caenorhabditis elegans


Alignment Length:216 Identity:81/216 - (37%)
Similarity:119/216 - (55%) Gaps:28/216 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 GASAAKSCVVEDDQSTDSDDAP-DLVEADPKETQ--PDEQGQLGTVAVRTREVSKQSRGERKARR 197
            |::..:...|::.|...|||:. :.||.:..|.|  ..|...||.   ...:.:||||.|:|||:
 Worm     3 GSTETRQKEVKEPQVDVSDDSDNEAVEQELTEEQRRVAEAAGLGD---HIDKQAKQSRSEKKARK 64

  Fly   198 ILMKLDLKPMENVARVTMKKGKNILLYIDQPDVYRVAHSSTYIFFGEICVEDTSTTSVASQAAVK 262
            :..||.||.:..|:||.::|.||||..|::|||::...|.|||.|||..:||     :...|.:.
 Worm    65 LFSKLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIED-----LTQHAQMS 124

  Fly   263 AAERFRGTSPAGRQGNEDGKAPGEESPH--DDDDDENDGEDADAMGLHAKDIELVQMQAACSRKK 325
            |.|..:               |..|:|.  ..::|||:..:.|:.|:..||||||..||..:|.|
 Worm   125 AIENLK---------------PTREAPQLKTVEEDENEDVEEDSTGIEEKDIELVISQANTTRNK 174

  Fly   326 AIQALLKNDNDVVNAIMALTV 346
            ||:||.:.|||:|||||:||:
 Worm   175 AIRALKEADNDIVNAIMSLTM 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gNacalphaNP_608561.2 NAC_NACA 203..249 CDD:409233 21/45 (47%)
UBA_NAC_euk 309..345 CDD:270541 22/35 (63%)
icd-2NP_490749.1 NAC_NACA 70..117 CDD:409233 23/51 (45%)
UBA_NAC_euk 158..194 CDD:270541 22/35 (63%)

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