DRSC/TRiP Functional Genomics Resources

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Protein Alignment IA-2 and PTPN13

DIOPT Version :10

Sequence 1:NP_608562.4 Gene:IA-2 / 33277 FlyBaseID:FBgn0031294 Length:1319 Species:Drosophila melanogaster
Sequence 2:XP_011530467.1 Gene:PTPN13 / 5783 HGNCID:9646 Length:2507 Species:Homo sapiens


Alignment Length:1269 Identity:260/1269 - (20%)
Similarity:419/1269 - (33%) Gaps:415/1269 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 ATHGDLAQAEGNVGCQFVRTLC-----------IPHSEVC--YDDNIFGKCIPTTGVDVEDIEKT 215
            |||....:...|.| |.|..|.           :|.:..|  .|.|       ..|...|.::||
Human  1434 ATHKQAVETLRNTG-QVVHLLLEKGQSPTSKEHVPVTPQCTLSDQN-------AQGQGPEKVKKT 1490

  Fly   216 PLTEDQSRVLATMLEELQ----GAGLGWDHPYVQCRIQGSLFSLQRQQQL-PPNLCANLAPTPPE 275
            ...:|.|.|......|::    .:|||              ||..|:..| |..:.|::......
Human  1491 TQVKDYSFVTEENTFEVKLFKNSSGLG--------------FSFSREDNLIPEQINASIVRVKKL 1541

  Fly   276 F-GDPAS--------------------------ALAYVRFTPPE-------------PEAELDYY 300
            | |.||:                          .::.:|.|.||             ||.:....
Human  1542 FPGQPAAESGKIDVGDVILKVNGASLKGLSQQEVISALRGTAPEVFLLLCRPPPGVLPEIDTALL 1606

  Fly   301 EQPAGPAQFYPALRKKQ-----VRESDADDMYLNRMLQDRRRLRHDPSELEHFGKMDGHGQSTQL 360
            .....|||..|...|..     |.:|.:.|.  |.|....::....||..:.:....|.|:...:
Human  1607 TPLQSPAQVLPNSSKDSSQPSCVEQSTSSDE--NEMSDKSKKQCKSPSRRDSYSDSSGSGEDDLV 1669

  Fly   361 DAPSIM--DAFLDTERQRIEREQQLAAAEQDADRRAEQNRLELYQI---------LAASEPDPQP 414
            .||:.:  ..:.....|.:......|.:..:|.:..|.....::..         ...|.|.|.|
Human  1670 TAPANISNSTWSSALHQTLSNMVSQAQSHHEAPKSQEDTICTMFYYPQKIPNKPEFEDSNPSPLP 1734

  Fly   415 YQRKP--AAQPNAMDQLEAIVEQQQQRELKEQQEQAKAPVYVPPEEVNESSELYFPDNFAPFKRA 477
            ....|  :.||.:.....:.:::.....:.|...|                     :|:.|.|  
Human  1735 PDMAPGQSYQPQSESASSSSMDKYHIHHISEPTRQ---------------------ENWTPLK-- 1776

  Fly   478 RGRSRGGLAEEVED------------EQPKRSF-FRELAGEQ-------GLVQEPP--------- 513
                 ..|...:||            :..|.|. |....|.|       .::|:|.         
Human  1777 -----NDLENHLEDFELEVELLITLIKSEKGSLGFTVTKGNQRIGCYVHDVIQDPAKSDGRLKPG 1836

  Fly   514 ---LRFRHVE----TEVDA---------TPELVKRRPASFKQLD--PY---DVSL--QQQEMAFE 555
               ::....:    |..||         |..||..|.....::.  |:   |::|  .::|:.|.
Human  1837 DRLIKVNDTDVTNMTHTDAVNLLRAASKTVRLVIGRVLELPRIPMLPHLLPDITLTCNKEELGFS 1901

  Fly   556 SGLLRNSLTPLEEEAMLASNSFPRQAKSQRVYTEGGLLLMP----QDEQDTDGMQADEPEN-VKQ 615
            .....:||    .:.:..|:..||...:    .||.|.|:.    .:...|.||..:|... :..
Human  1902 LCGGHDSL----YQVVYISDINPRSVAA----IEGNLQLLDVIHYVNGVSTQGMTLEEVNRALDM 1958

  Fly   616 SLLANMLGFARHE--------RLDVKKP---------------GPLLGPP---SLGSAELSNQLE 654
            ||.:.:|...|::        |..|..|               .|.|.|.   |..:.|..|::.
Human  1959 SLPSLVLKATRNDLPVVPSSKRSAVSAPKSTKGNGSYSVGSCSQPALTPNDSFSTVAGEEINEIS 2023

  Fly   655 TEK----AHKQKGHGNKEVLPAHIKGN--DEDDAHKKKKVMKQQHSAEDHAPHTVDTEYVHVFVK 713
            ..|    .::.||..|. .||   ||:  ::...:.|.....:.:..||                
Human  2024 YPKGKCSTYQIKGSPNL-TLP---KGSFPNQSSNYSKCPNNSESYIQED---------------- 2068

  Fly   714 NPIDSWNDGQRIMKELEQILHMQGYFSYLTVQQHEVSFRVNSNNPERKTAGDVARTINENRGVKN 778
               |.::|.|    |.|.|.      |.|.|...|....:|.||....:.|.....:|       
Human  2069 ---DIYDDSQ----EAEVIQ------SLLDVVDEEAQNLLNENNAAGYSCGPGTLKMN------- 2113

  Fly   779 NIQRRVGFYVLHAGVGDVIKDLQDPSVSSSRIELAEQGPDVTHIMAYMFAGAGAAAVIVIFVTLI 843
                                    ..:|..|.|  :...|.:.:..|.                 
Human  2114 ------------------------GKLSEERTE--DTDCDGSPLPEYF----------------- 2135

  Fly   844 LIKRHDRKRDKLGGLQSGIAGAETCSKDYQELCRARMAGKAGGGGNSTGGAAGGGSNEPAPSGRI 908
                  .:..|:.|          |    :|.|..::..:               |....|..:.
Human  2136 ------TEATKMNG----------C----EEYCEEKVKSE---------------SLIQKPQEKK 2165

  Fly   909 T---SLSKENEGRPPSSRSSTSSWSEEPALTNMDIS-------------TGHMVLSYME--DHLR 955
            |   .::..|:..|....:...|..:...|||.:::             ||..:.|.:.  ..|.
Human  2166 TDDDEITWGNDELPIERTNHEDSDKDHSFLTNDELAVLPVVKVLPSGKYTGANLKSVIRVLRGLL 2230

  Fly   956 NKGRLQREWEALCRYEAEPSAREAASQPQC--------AGLNRPGAPLPYDHSRVVLNHLANAEG 1012
            ::|...:|.|.|         :|.....||        ...||....||||.:||.|..    ||
Human  2231 DQGIPSKELENL---------QELKPLDQCLIGQTKENRRKNRYKNILPYDATRVPLGD----EG 2282

  Fly  1013 LDYVNASTITDHDPRAP------AYVAAQGPLPSTLAHFWQMIWEQGAVVIVALCRLQENGEVAC 1071
             .|:|||.|     :.|      .|:|.|||||:|:..||||||||.:.||..:.:..|..::.|
Human  2283 -GYINASFI-----KIPVGKEEFVYIACQGPLPTTVGDFWQMIWEQKSTVIAMMTQEVEGEKIKC 2341

  Fly  1072 ARYWPEEGAEVYHIYEVHLVSEHI--------WCDDYLVRSFYLKNLRTSETRTVTQFHFLSWPH 1128
            .||||.      .:.:..:||..:        ....::||:..|::::|.|.|.::..:|.:||.
Human  2342 QRYWPN------ILGKTTMVSNRLRLALVRMQQLKGFVVRAMTLEDIQTREVRHISHLNFTAWPD 2400

  Fly  1129 MGVPAQAKALLDFRRKVNKSYRGRRSCPIVVHGSAGAGRTGVYILLDLVLERMNKGAREIDIAAT 1193
            ...|:|...||.|   ::......||.||:.|.|||.||:|..|.:|:||..:::.. :.||:..
Human  2401 HDTPSQPDDLLTF---ISYMRHIHRSGPIITHCSAGIGRSGTLICIDVVLGLISQDL-DFDISDL 2461

  Fly  1194 LEHLRDQRAGVVATRQQFEF---VLMAVAEEVHA 1224
            :..:|.||.|:|.|..|:.|   |::.|...:.|
Human  2462 VRCMRLQRHGMVQTEDQYIFCYQVILYVLTRLQA 2495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IA-2NP_608562.4 Receptor_IA-2 705..795 CDD:463293 15/89 (17%)
PTP_DSP_cys 942..1225 CDD:475123 96/310 (31%)
PTPN13XP_011530467.1 KIND 3..190 CDD:214801
FERM_F1_PTPN13 571..666 CDD:340715
B41 573..781 CDD:214604
PH-like 777..877 CDD:473070
PDZ1_PTPN13-like 1090..1181 CDD:467285
PTN13_u3 1177..1367 CDD:465189
PDZ2-PTPN13_FRMPD2-like 1365..1456 CDD:467254 8/22 (36%)
PDZ3_PTPN13_FRMPD2-like 1504..1593 CDD:467181 18/102 (18%)
PDZ4_PTPN13-like 1789..1873 CDD:467182 13/83 (16%)
PDZ5_PTPN13-like 1884..1970 CDD:467183 20/93 (22%)
PTPc-N13 2257..2490 CDD:350445 83/252 (33%)
Blue background indicates that the domain is not in the aligned region.

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