DRSC/TRiP Functional Genomics Resources

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Protein Alignment IA-2 and ptprnb

DIOPT Version :9

Sequence 1:NP_608562.4 Gene:IA-2 / 33277 FlyBaseID:FBgn0031294 Length:1319 Species:Drosophila melanogaster
Sequence 2:XP_005165924.1 Gene:ptprnb / 564351 ZFINID:ZDB-GENE-100505-1 Length:945 Species:Danio rerio


Alignment Length:1161 Identity:388/1161 - (33%)
Similarity:527/1161 - (45%) Gaps:309/1161 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 LLLILLLAT------HGDLAQAEGNVGCQFVRTLCIPHSEVCYDDNIFGKCIPTTGVDVEDIEKT 215
            |.:::.|||      .||      ..||.|...|| ...|:|:||.:||:|              
Zfish     6 LWMLVCLATACCQLGTGD------KYGCLFDEGLC-SRGEICWDDELFGQC-------------- 49

  Fly   216 PLTEDQS----RVLATMLEELQG-------AGLGWDHPYVQCRIQGSLFSLQRQQQLPPNLCANL 269
             |.|.|.    ||.|.:|:.||.       .||.|.....|..|:..|..:              
Zfish    50 -LAERQERFRYRVTAVLLDRLQSLLQTLMKEGLTWQDDVTQSVIKKELSKV-------------- 99

  Fly   270 APTPPEFGDPASALAYVRFTPPEPEAELDYYEQPAGPAQFYPALRKKQVRESDADDMYLNRMLQD 334
                     |...|:......|..|::.....|          |..||...      |::.|:.|
Zfish   100 ---------PKIPLSSGTKNGPSIESQSGSTNQ----------LNSKQAHP------YMDYMIVD 139

  Fly   335 -RRRLRH----DPSELEHFGKMDGHGQSTQLDAPSIMDAFLDTERQRIEREQQLAAAEQ------ 388
             .:...|    ||...:.:|..|...:|..|                :|:.:..|::.:      
Zfish   140 PPQSSLHMQSLDPYSYQRYGYQDEEERSLNL----------------VEKGRYPASSSRVRGNPP 188

  Fly   389 -----DADRRAEQNRLELYQILAASEPDPQPYQRKPAAQPNA----MDQLEAIVEQQ-------- 436
                 |.|   :|...:|..:|.:|  ..||..|...|.|::    ...|:..:|.:        
Zfish   189 VPPSLDKD---DQLLQDLMTLLLSS--PAQPSSRHRVAAPHSTSSFFQDLDFPLEYKDYNKDTFS 248

  Fly   437 QQRELKEQQEQAKAPVYVPPEEVNESSELYFPDNFAPFK--RARGRSRGGLAE----------EV 489
            |...:..|:|..|.                 |..:..|.  .|.|.|:.||.|          .:
Zfish   249 QDERISSQREPKKG-----------------PQKYGSFSAHSAAGTSQQGLNELLLQHGFDLNHL 296

  Fly   490 EDEQPKRSFFRELAGEQGLVQEPPLRFRHVETEVDATPELVKRRPASFKQLDPYDVSLQQQEMAF 554
            ..|:.:|.|    :..|.|..|||...|..|.:..:.|              |..:.:.:.||..
Zfish   297 NPEEMERLF----SVLQFLQNEPPNNQRKSEAKDSSAP--------------PKVMKITEGEMTH 343

  Fly   555 ESGLLRNSLTPLEEEAMLASNSFPRQAKSQRVYTEGGLLLMPQDEQDTDGMQADEPENVKQSLLA 619
                      .:|:.:..||||                              :..|         
Zfish   344 ----------VVEKASSPASNS------------------------------SSPP--------- 359

  Fly   620 NMLGFARHERLDVKKPGPLLGPPSLGS--AELSNQLETEKA------HKQK----GHGNKEVLPA 672
                         .||||...|.|.||  |...|.:.|..:      .||:    |.|...|.|.
Zfish   360 -------------LKPGPQTSPKSPGSPGASKDNSIPTGASVLGPLTLKQEEGPLGKGALSVQPG 411

  Fly   673 HIKGNDEDDAHKKKKVMKQQHSAEDHAPHTVDTEYVHVFVKNPIDSWNDGQRIMKELEQILHM-Q 736
                       |.|..:|::..            |: |..::|: :.:||..::|.|.:.:|: .
Zfish   412 -----------KNKTKIKEEFG------------YI-VTNQSPL-NLSDGVHLLKTLAERIHLTT 451

  Fly   737 GYFSYLTVQQHEVSFRVNSNNPERKTAGDVA-RTINENRGVKNNIQRRVGFYVLHAGVGDVIKDL 800
            ..|..::|....|:|||..|: :..||.::: :|:.:    ||.::...|..||.||||:     
Zfish   452 DSFINISVVGPAVTFRVLPNS-QNLTASEISEKTVAQ----KNLLETETGLKVLQAGVGE----- 506

  Fly   801 QDPSVSSSRIELAEQGPDVTHIMAYMFAG-AGAAAVIVIFVTLILIKRHDR--KRDKLG-GLQSG 861
               ......:.:|.:..|.|..:..||.| |....::|..:|:..::.|.|  ...||| |.::|
Zfish   507 ---KSEGHALPVATRVRDNTQWVFLMFVGVACLGGLLVGALTIACLRTHARHLASGKLGLGPEAG 568

  Fly   862 IAGAETCSKDYQELCRARMAGKA---------GGGGNSTGGAAGGGSNEPAPSGRITSLSKENEG 917
                .....:||:|||..||.|:         |..|.:..||.|||......:.|::|:|.:...
Zfish   569 ----NVTHYEYQDLCRQHMAAKSSLGRQDCGVGAAGGAGPGAVGGGGGGGTDTSRVSSVSSQFSD 629

  Fly   918 RP---PSSRSSTSSWSEEPALTNMDISTGHMVLSYMEDHLRNKGRLQREWEALCRYEAEPSAREA 979
            .|   |||.|||.||.||||.:|||||||||:|:||||||:||.||.:||||||.|:||||...|
Zfish   630 APQPSPSSHSSTPSWCEEPAQSNMDISTGHMILAYMEDHLKNKDRLLKEWEALCSYQAEPSTISA 694

  Fly   980 ASQPQCAGLNRPGAPLPYDHSRVVLNHLANAEGLDYVNASTITDHDPRAPAYVAAQGPLPSTLAH 1044
            |........||....:|||||||.|....|....||:|||||.:||||.|||:|.||||..|::.
Zfish   695 AQSESNIKKNRCSDAVPYDHSRVKLKAEINPSRTDYINASTIIEHDPRMPAYIATQGPLSHTISD 759

  Fly  1045 FWQMIWEQGAVVIVALCRLQENGEVACARYWPEEGAEVYHIYEVHLVSEHIWCDDYLVRSFYLKN 1109
            ||||:||.|..|||.:..|.|:||..|.||||:||:.:||||||:||||||||:|:|||||||||
Zfish   760 FWQMVWESGCTVIVMMTALVEDGEKQCDRYWPDEGSSLYHIYEVNLVSEHIWCNDFLVRSFYLKN 824

  Fly  1110 LRTSETRTVTQFHFLSWPHMGVPAQAKALLDFRRKVNKSYRGRRSCPIVVHGSAGAGRTGVYILL 1174
            ::|.||||:|||||||||..|:|...:.||||||||||.||| |||||:||.|.|.||||.|||:
Zfish   825 VQTQETRTLTQFHFLSWPAQGIPTSTRPLLDFRRKVNKCYRG-RSCPIIVHCSDGTGRTGTYILI 888

  Fly  1175 DLVLERMNKGAREIDIAATLEHLRDQRAGVVATRQQFEFVLMAVAEEVHAILKALP 1230
            |:||.||.||.:||||||||||:||||.|:|.|:.||||.|.||||||:|||||||
Zfish   889 DMVLNRMAKGVKEIDIAATLEHIRDQRPGMVRTKDQFEFALTAVAEEVNAILKALP 944

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IA-2NP_608562.4 Receptor_IA-2 708..795 CDD:288410 25/88 (28%)
PTPc 960..1220 CDD:214550 166/259 (64%)
PTPc 995..1220 CDD:238006 150/224 (67%)
ptprnbXP_005165924.1 RESP18 47..>114 CDD:291609 20/104 (19%)
Receptor_IA-2 422..507 CDD:288410 27/111 (24%)
PTPc 675..934 CDD:214550 166/259 (64%)
PTPc 702..934 CDD:238006 152/232 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 334 1.000 Domainoid score I1101
eggNOG 1 0.900 - - E2759_KOG0793
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 518 1.000 Inparanoid score I1238
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D281324at33208
OrthoFinder 1 1.000 - - FOG0002390
OrthoInspector 1 1.000 - - otm24269
orthoMCL 1 0.900 - - OOG6_105521
Panther 1 1.100 - - O PTHR46106
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1583
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.870

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