DRSC/TRiP Functional Genomics Resources

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Protein Alignment IA-2 and ptprk

DIOPT Version :10

Sequence 1:NP_608562.4 Gene:IA-2 / 33277 FlyBaseID:FBgn0031294 Length:1319 Species:Drosophila melanogaster
Sequence 2:XP_021324241.1 Gene:ptprk / 555348 ZFINID:ZDB-GENE-030131-9834 Length:1496 Species:Danio rerio


Alignment Length:621 Identity:161/621 - (25%)
Similarity:261/621 - (42%) Gaps:132/621 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   740 SYLTVQQHEVSFRVNSNNPERKTAGDVARTINENR---GVKN-NIQRRVGFYVLHAGVGDVIKDL 800
            ||.:.....:.:...:..|.|.....:..|:.:|:   |..| .:..|..:.:....|..|.|:.
Zfish   656 SYQSAVSSGLPYYFAAEIPPRNLQEPLPFTVGDNKTYHGYWNAPLAPRKDYNIYFQAVSRVEKES 720

  Fly   801 QDPSVSSSRIELAEQG--------PDVTHIMAYMFAGAGAAAVIVIFVTLILI------KRHD-- 849
            :     :..::||.:|        ||.......:...||.:|.:::|:.|:|:      ||..  
Zfish   721 K-----TQCLKLAFKGATEEPEVIPDPAKQTDQVVKIAGISAAVLVFILLVLVAILLLKKRRSYY 780

  Fly   850 ----------RKRDKLGGL-----------------QSGIAGAETCSKDYQE-------LCRARM 880
                      :::|.:|..                 ||.:...|..:..:.:       |....:
Zfish   781 SYSYYLKLAKKRKDAIGNTRQEMTHMVNSMDRSYADQSTLHAEEPMTVTFMDSHNFSNRLPNEPL 845

  Fly   881 AGKAGGGGNSTGGAAGGGSNEPAPSGRITSLSKEN-EGRPPSSRSSTSSWSEEPALTNMDISTGH 944
            ...|....|.|..||.      |.:.|:..:.:.: ||    :.|...:....||:...|: ..|
Zfish   846 VPTAVLDENHTAAAAA------AENSRLLDIPRYHCEG----TESPYQTGQLHPAIRVADL-LQH 899

  Fly   945 MVLSYMEDHLRNKGRLQREWEALCRYEAEPSAREAASQPQCAGLNRPGAPLPYDHSRVVLNHLAN 1009
            :.|....|....|    .|:|:.  :|.:.::.:||.:.|....||.|..:.||||||:|..:.:
Zfish   900 INLMKTSDSYGFK----EEYESF--FEGQSASWDAAKKEQNRTKNRYGNIIAYDHSRVILQPMED 958

  Fly  1010 AEGLDYVNASTI--------------------------TDHDPRAPAYVAAQGPLPSTLAHFWQM 1048
            ....||:||:.|                          .|...|...|:|.|||:..|:..||:|
Zfish   959 DPSSDYINANYIDVSGDAASSSIGERVRNVSPSLIWLYRDGYQRPSHYIATQGPVHETVYDFWRM 1023

  Fly  1049 IWEQGAVVIVALCRLQENGEVACARYWPEEGAEVYHIYEVHLVSEHIWCDDYLVRSFYLKNLRTS 1113
            ||::.:..||.:..|.|.|.|.|.:|||:: ||||..::|..|...... :|:||:|.|:....:
Zfish  1024 IWQEQSACIVMVTNLVEVGRVKCYKYWPDD-AEVYGDFKVTFVEVEPLA-EYVVRTFTLERRGFN 1086

  Fly  1114 ETRTVTQFHFLSWPHMGVPAQAKALLDFRRKVNKSYRGRRSCPIVVHGSAGAGRTGVYILLDLVL 1178
            |.|.|.||||..||..|||..|..||.|.|:|..| ....:.|||||.||||||||.||::|::|
Zfish  1087 EVREVKQFHFTGWPDHGVPYHATGLLSFIRRVKMS-NPPTAGPIVVHCSAGAGRTGCYIVIDIML 1150

  Fly  1179 ERMNKGAREIDIAATLEHLRDQRAGVVATRQQFEFVLMAVAEEVHAILKALP------------- 1230
            : |.:....:||...::.||.:|..:|.|.:|:.|:..|:.|.......|:|             
Zfish  1151 D-MAEREGVVDIYNCVKALRSRRINMVQTEEQYIFIHDAILEACLCGETAIPVCEFKAAYYDMIR 1214

  Fly  1231 ----ANTSGEKRELDKDPVVGGGSSSTTTKEPLKED 1262
                :|:|..|.|..        :.::.|.:|..||
Zfish  1215 IDSQSNSSHLKDEFQ--------TLNSVTPQPQPED 1242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IA-2NP_608562.4 Receptor_IA-2 705..795 CDD:463293 10/58 (17%)
PTP_DSP_cys 942..1225 CDD:475123 107/308 (35%)
ptprkXP_021324241.1 MAM 30..191 CDD:214533
IG_like 201..282 CDD:214653
Ig strand B 211..215 CDD:409549
Ig strand C 225..231 CDD:409549
Ig strand E 249..256 CDD:409549
Ig strand F 266..271 CDD:409549
fn3 293..370 CDD:394996
fn3 491..582 CDD:394996
PTP_DSP_cys 895..1194 CDD:475123 108/309 (35%)
R-PTPc-K-2 1280..1491 CDD:350484
Blue background indicates that the domain is not in the aligned region.

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