DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IA-2 and ptpn18

DIOPT Version :10

Sequence 1:NP_608562.4 Gene:IA-2 / 33277 FlyBaseID:FBgn0031294 Length:1319 Species:Drosophila melanogaster
Sequence 2:XP_068079039.1 Gene:ptpn18 / 541324 ZFINID:ZDB-GENE-050320-12 Length:514 Species:Danio rerio


Alignment Length:308 Identity:94/308 - (30%)
Similarity:144/308 - (46%) Gaps:24/308 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   935 LTNMDISTGHMVLSYMEDHLRNKGRLQREWEALCRYEAEPSAREAASQPQCAGLNRPGAPLPYDH 999
            |:|.|.| |..::|.....:|.|....:|...|        ...|....:....||....||||.
Zfish    16 LSNHDRS-GDQLISSEFSLIRKKTASLKEDYGL--------TTNAGGMKENVKKNRYRDILPYDQ 71

  Fly  1000 SRVVLNHLANAEGLDYVNASTITDHDPRAPAYVAAQGPLPSTLAHFWQMIWEQGAVVIVALCRLQ 1064
            :||.|....:....||:||:.:.. ..|...|:|.||||.||:..||:|||:....||:..||..
Zfish    72 TRVCLTPTTSEYQSDYINANFVKG-AVRNRTYIATQGPLSSTVVDFWRMIWQHNVKVIIMACREI 135

  Fly  1065 ENGEVACARYWPE-EGAEVYHIYEVHLVSEHIWCDDYLVRSFYLKNLRTSETRTVTQFHFLSWPH 1128
            |.|:..|..||.. ........:.|..:.|....::.:||:..:.  ...|.|.|:.|.:.:||.
Zfish   136 EMGKKKCEVYWASTSDTSTLGPFTVSTLEESRPNEEVIVRTLVVN--YCDEARKVSHFQYTAWPD 198

  Fly  1129 MGVPAQAKALLDFRRKVNKSYRGRRSCPIVVHGSAGAGRTGVYILLD-----LVLERMNKGAREI 1188
            .|:|.....:|.. .::.:..:|.::.|:|:|.|||.|||||...:|     |:.|::.:....:
Zfish   199 HGIPDMPDGILGM-MELARQKQGNQTDPVVIHCSAGCGRTGVICAVDYVNDLLLTEQIQEDFNIL 262

  Fly  1189 DIAATLEHLRDQRAGVVATRQQFEFVLMAVAEEVHAIL--KALPANTS 1234
            |:  .|| ||.||...|.|::|:.||...||:.....|  |.:.|:||
Zfish   263 DL--VLE-LRRQRPSAVQTKEQYGFVFHTVAQMFQKALEMKNMNADTS 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IA-2NP_608562.4 Receptor_IA-2 705..795 CDD:463293
PTP_DSP_cys 942..1225 CDD:475123 85/288 (30%)
ptpn18XP_068079039.1 PTPc-N18 28..293 CDD:350451 84/279 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.