DRSC/TRiP Functional Genomics Resources

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Protein Alignment IA-2 and Ptpmeg

DIOPT Version :9

Sequence 1:NP_608562.4 Gene:IA-2 / 33277 FlyBaseID:FBgn0031294 Length:1319 Species:Drosophila melanogaster
Sequence 2:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster


Alignment Length:1079 Identity:219/1079 - (20%)
Similarity:353/1079 - (32%) Gaps:356/1079 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   369 FLD--TERQRIEREQQLAAAEQDADRRAEQNRL--ELYQILAASEPD------PQPYQRKPAAQP 423
            |||  |...|||             :||:.:.|  :::|.|..||.|      ||    ||....
  Fly    40 FLDDITHTFRIE-------------KRAKGSELLDQVFQYLELSERDYFGLLFPQ----KPGDVV 87

  Fly   424 NAMDQLEAIVEQQQQRELKEQQEQAKAPVYVPPEEVNESSELYFPDNFAPFKRARGRSRGGLAEE 488
            ..:|         .|::.|:|                 .|.:...::..|....|.:........
  Fly    88 RWVD---------AQKQFKKQ-----------------CSSVSLDNDAVPLLEFRVKFFVSDPSR 126

  Fly   489 VEDEQPKRSFFREL---------------------------AGEQGLVQEPPLRFRHVETEVDAT 526
            :::|..:..|:.::                           .|:...::..|.....::...|.|
  Fly   127 LQEEFTRYQFYLQIKRNILLGKLPCSSNTQCLLASYTVQSELGDFNALEHQPGYLSGMQLLCDQT 191

  Fly   527 PELVKR-----------RPAS--------FKQLDPYDVSLQQQE----------------MAFES 556
            .|..::           .||.        .|:|:.|.:.|.:..                :.|:.
  Fly   192 TEAERKVGELHKLHRGQLPADAEYNYLEHAKRLELYGIDLHRATDSNGKELQLGVSAVGLLVFQH 256

  Fly   557 GLLRNSLTPLEEEAMLASNSFPRQAKSQRVYTEGGLLLMPQDEQDTDGMQADEPENVKQSLLANM 621
            .|..|:.:    .:.:...||.|:....::..|      |.:..||                  :
  Fly   257 SLRVNTFS----WSKMVKVSFKRKDFFIQLRRE------PSENYDT------------------L 293

  Fly   622 LGFA----------------RHERLDVKKPGPL-------LGPPSLGSAELSNQLETEKAHKQKG 663
            |||.                .|....:|:|..|       ||.....|..  .:|:..:..||:|
  Fly   294 LGFGMSSHKHAKALWKSCVEHHSFFRLKRPHRLSRFLNISLGSKFYYSGR--TELQAVQESKQRG 356

  Fly   664 HGNKEVLPAHIK-----GNDEDDAHKKKKVMKQQHSAEDHAPHTVDTEYVHVFVKNPIDSWNDGQ 723
            ..:|..:.:..|     ......:........||||..:.|                 :|.|:|:
  Fly   357 RIHKVFVRSPSKRLLGAAGGVGTSGSSGGTPMQQHSGSESA-----------------NSHNNGK 404

  Fly   724 RIMKELEQILHMQGYFSYLTVQQHEVSFRVNSNNPERKTAGDVARTINENRGVKNNIQRRVGFYV 788
                       ..|..:.||:.:   :.|.:.|....|.|..:.|...|.:..:.:||..|||. 
  Fly   405 -----------PAGAGTILTITK---TSRPHDNKVTSKEADSMPRKAWEQQSDEYDIQLDVGFI- 454

  Fly   789 LHAGVGDVIKDLQDPSVSSSRIELAEQGPDVTHIMAYMFAGAGAAAVIVIFVTLILIKRHDR--- 850
                           ...:.|.|.|...|...   ||   .:|..:.|::..|:.....|.:   
  Fly   455 ---------------EQCTRRFESASPSPMPP---AY---SSGQHSPILLPTTIADAVGHQQPES 498

  Fly   851 ---------KRDKLGGLQSGIAGAETCSKDYQ----------ELCRARMAGKAGGGGNSTGGAAG 896
                     :.|:.|.....:.|....|...|          :.|..|:.  .|.......|...
  Fly   499 GSDLITIRLQADEQGRYGFNVKGGVDLSLPVQVSKVVPHTPADRCTPRVC--EGDEVLMINGRDV 561

  Fly   897 GGSNEPAPSGRITSLSKENEG------RPPSSRSSTSSWSEEPAL----------TNMDISTGHM 945
            .|.........|.....:..|      ||  .||:.....|||..          ::.::..|..
  Fly   562 HGLRHEQVVAMIRDCRHQASGELLLTVRP--QRSAPLLLEEEPLYQYVPESDEIGSHSNLLDGDA 624

  Fly   946 V----LSYMEDHLRNKGRLQREWEALCRYEAEPSAREAASQPQCAGLNRPGAPLPYDHSRVVLNH 1006
            :    |..:.|.|.: |.|..::|.:.|...:.:..| |.:|..|..||.....|||.:||   .
  Fly   625 LFTQSLLLLSDGLAS-GALLAQYELMYRKNPDLAITE-ARKPANAPKNRYRDISPYDCTRV---S 684

  Fly  1007 LANAEGLDYVNASTITDHDPRAPA--YVAAQGPLPSTLAHFWQMIWEQGAVVIVALCRLQENGEV 1069
            |.|:...||:||:.:....|....  |:|.||||.||...||:|:.::.:.::|.|..:.|:|..
  Fly   685 LVNSLTGDYINANYVNMEIPGGAVNRYIATQGPLASTTTDFWRMVQQESSHLLVMLTTVMESGRQ 749

  Fly  1070 ACARYWPEEGAEVY--HIYEVHLVSEHIWCDD---YLVRSFYLKNLRTSETRTVTQFHFLSWPHM 1129
            .|.:|||..|.|:.  ..:.|..:||.  .|:   ::.|.|.||:  ..|.|.:....:|:||..
  Fly   750 KCHQYWPVTGEELQLAEGFSVRCLSEK--PDETGSFVFREFVLKD--KHEQRHIHHMQYLAWPDH 810

  Fly  1130 GVPAQAKALLDFRRKVNKSYRGR-------------------------------RSC-------- 1155
            .||:.....|:|..:| ::.|.|                               |.|        
  Fly   811 CVPSDPNLFLEFTERV-RAARNRTLLQEIEESLKQVRLMDADADADENGGLMRERKCAASNGATP 874

  Fly  1156 -------------------PIVVHGSAGAGRTGVYILLDLVLERMNKGARE----IDIAATLEHL 1197
                               |::||.|||.|||||.||:|..|..|.  |||    :||..|   :
  Fly   875 EDETPVSTSVHQCISAANPPVIVHCSAGIGRTGVLILMDTALALME--AREPVYPLDIVRT---M 934

  Fly  1198 RDQRAGVVATRQQFEFVLMAVAEEVHAILKALPANTSGE 1236
            |||||.:|....|:.||...:......|.::..|....|
  Fly   935 RDQRACMVQNVSQYRFVCECICAAYMKISRSSAAINDDE 973

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IA-2NP_608562.4 Receptor_IA-2 708..795 CDD:288410 17/86 (20%)
PTPc 960..1220 CDD:214550 95/328 (29%)
PTPc 995..1220 CDD:238006 86/293 (29%)
PtpmegNP_001163309.2 B41 35..232 CDD:214604 38/234 (16%)
FERM_N 38..102 CDD:286467 23/104 (22%)
FERM_M 125..232 CDD:278785 12/106 (11%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 16/121 (13%)
FA 333..369 CDD:285894 8/37 (22%)
PDZ_signaling 502..589 CDD:238492 12/88 (14%)
Y_phosphatase 666..955 CDD:278528 89/301 (30%)
PTPc 668..955 CDD:238006 88/299 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443531
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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