DRSC/TRiP Functional Genomics Resources

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Protein Alignment IA-2 and ptpn4a

DIOPT Version :10

Sequence 1:NP_608562.4 Gene:IA-2 / 33277 FlyBaseID:FBgn0031294 Length:1319 Species:Drosophila melanogaster
Sequence 2:XP_068079424.1 Gene:ptpn4a / 368448 ZFINID:ZDB-GENE-030616-449 Length:929 Species:Danio rerio


Alignment Length:308 Identity:105/308 - (34%)
Similarity:158/308 - (51%) Gaps:27/308 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   932 EPALTNMDISTGHMVLSYMEDHLRNKGRLQREWEALCRYEAEPS-AREAASQPQCAGLNRPGAPL 995
            :|:..:.|.....|:  |:::.| |.|.:..:::.|  |...|. ....|..||....||.....
Zfish   631 DPSHLDQDAWRDSML--YLKEGL-NSGTILAQFDQL--YRKRPGMTMSCAKLPQNISKNRYRDIS 690

  Fly   996 PYDHSRVVLNHLANAEGLDYVNASTITDHDPRAP---AYVAAQGPLPSTLAHFWQMIWEQGAVVI 1057
            |||.:||:|....     ||:||:.|....|...   .|:|.|||||:|.:.||||.||||:.::
Zfish   691 PYDATRVILKGTE-----DYINANYINMEIPACSLINRYIACQGPLPNTCSDFWQMTWEQGSSMV 750

  Fly  1058 VALCRLQENGEVACARYWPE-EGAEVYHIYEVHLVSEHIWCDDYLVRSFYLKNLRTSETRTVTQF 1121
            |.|....|.|.|.|.:|||. .|:..|..:::...:|. ....:|||...|.::.:.|:|.:||.
Zfish   751 VMLTTQVERGRVKCHQYWPNPSGSATYGGFQISCQTEE-GNSAFLVREITLTHIESGESRELTQI 814

  Fly  1122 HFLSWPHMGVPAQAKALLDFRRKVNKSYRGRRSCPIVVHGSAGAGRTGVYILLD--LVLERMNKG 1184
            .:|:||..|||..:...|||...|.....|:.. |:|||.|||.|||||.|.::  :.|...::.
Zfish   815 QYLAWPDHGVPDDSTDFLDFVALVRNKRAGKDE-PVVVHCSAGIGRTGVLITMETAMCLMECSQP 878

  Fly  1185 AREIDIAATLEHLRDQRAGVVATRQQFEFV---LMAVAEEVHAILKAL 1229
            ...::|..|   :|||||.::.|..||:||   ::.|.||  .::|.|
Zfish   879 VFPLEIVRT---MRDQRAMMIQTPSQFKFVCEAILKVYEE--GLVKPL 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IA-2NP_608562.4 Receptor_IA-2 705..795 CDD:463293
PTP_DSP_cys 942..1225 CDD:475123 101/292 (35%)
ptpn4aXP_068079424.1 B41 30..222 CDD:214604
FERM_C_PTPN4_PTPN3_like 216..310 CDD:270010
FA 324..365 CDD:462582
PDZ_PTPN3-4-like 514..603 CDD:467190
PTPc-N4 704..915 CDD:350449 80/215 (37%)
Blue background indicates that the domain is not in the aligned region.

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