DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IA-2 and Ptpre

DIOPT Version :10

Sequence 1:NP_608562.4 Gene:IA-2 / 33277 FlyBaseID:FBgn0031294 Length:1319 Species:Drosophila melanogaster
Sequence 2:NP_001303607.1 Gene:Ptpre / 19267 MGIID:97813 Length:719 Species:Mus musculus


Alignment Length:423 Identity:121/423 - (28%)
Similarity:183/423 - (43%) Gaps:110/423 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   892 GGAAGGGSNEPAPSGRIT------------SLSKENEGRPPSSRSSTSSW-----------SEEP 933
            |||.  |:..|.| ||.|            |||....|:...:..:.|:|           :.:|
Mouse     6 GGAI--GATAPVP-GRCTMEPFCPLLLASFSLSLARAGQGNDTTPTESNWTSTTAGPPDPGASQP 67

  Fly   934 ALT------------------------NMDISTGH----------------MVLS---------- 948
            .||                        ...:|:..                |:||          
Mouse    68 LLTWLLLPLLLLLFLLAAYFFRFRKQRKAVVSSNDKKMPNGILEEQEQQRVMLLSRSPSGPKKFF 132

  Fly   949 -----YMEDHLRNKG-----RLQREWEALCRYEAEPSAR-----EAASQPQCAGLNRPGAPLPYD 998
                 ::|:.:|.:.     |.:.|:.:|      ||..     |.|::.:....||....||.|
Mouse   133 PIPVEHLEEEIRVRSADDCKRFREEFNSL------PSGHIQGTFELANKEENREKNRYPNILPND 191

  Fly   999 HSRVVLNHLANAEGLDYVNASTITDHDPRAPAYVAAQGPLPSTLAHFWQMIWEQGAVVIVALCRL 1063
            |.||:|:.:......||:|||.|..:..: ..::|||||...|:..||:|:|||.:..||.|..|
Mouse   192 HCRVILSQVDGIPCSDYINASYIDGYKEK-NKFIAAQGPKQETVNDFWRMVWEQRSATIVMLTNL 255

  Fly  1064 QENGEVACARYWPEEGAEVYHIYEVHLVSEHIWCDDYLVRSFYL-KNLRTS--ETRTVTQFHFLS 1125
            :|..|..|.:|||::|...|....| .|.:.:...||.:|.|.: ..|..|  ..|.|:|.||.|
Mouse   256 KERKEEKCYQYWPDQGCWTYGNIRV-CVEDCVVLVDYTIRKFCIHPQLPDSCKAPRLVSQLHFTS 319

  Fly  1126 WPHMGVPAQAKALLDFRRKV---NKSYRGRRSCPIVVHGSAGAGRTGVYILLDLVLERMNKGARE 1187
            ||..|||.....:|.|.:||   |.|:.|    |||||.|||.||||.:|::|.::: |....::
Mouse   320 WPDFGVPFTPIGMLKFLKKVKTLNPSHAG----PIVVHCSAGVGRTGTFIVIDAMMD-MIHSEQK 379

  Fly  1188 IDIAATLEHLRDQRAGVVATRQQFEFVLMAVAE 1220
            :|:...:..:|:||..:|.|..|:.|:..|:.|
Mouse   380 VDVFEFVSRIRNQRPQMVQTDVQYTFIYQALLE 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IA-2NP_608562.4 Receptor_IA-2 705..795 CDD:463293
PTP_DSP_cys 942..1225 CDD:475123 102/326 (31%)
PtpreNP_001303607.1 R-PTPc-E-1 184..412 CDD:350468 87/234 (37%)
PTP_DSP_cys 499..708 CDD:475123
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.