DRSC/TRiP Functional Genomics Resources

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Protein Alignment IA-2 and Ptpn20

DIOPT Version :10

Sequence 1:NP_608562.4 Gene:IA-2 / 33277 FlyBaseID:FBgn0031294 Length:1319 Species:Drosophila melanogaster
Sequence 2:XP_006518791.1 Gene:Ptpn20 / 19256 MGIID:1196295 Length:463 Species:Mus musculus


Alignment Length:351 Identity:112/351 - (31%)
Similarity:163/351 - (46%) Gaps:35/351 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   889 NSTGGAAGGGSNEPAP--SGRITSLSKENEGRPPSSRSSTSSWSEEPALTNMDISTGHMVLSYME 951
            ||......|.|...:|  ||. :.|||:.| ...|.:..|......|.:.|   |:....:....
Mouse   132 NSMDSETAGPSKTVSPVLSGS-SRLSKDTE-TSVSEKELTQLAQIRPLIFN---SSARSAMRDCL 191

  Fly   952 DHLRNKGRLQ--REWEALCRYEAE----PSAREAASQPQCAGLNRPGAPLPYDHSRVVLNHLANA 1010
            :.|:.|..|.  ||:     .|.|    |....:.:..|....||....||||.:||.|     .
Mouse   192 NTLQKKEELDIIREF-----LELEQMTLPDDFNSGNTLQNRDKNRYRDILPYDSTRVPL-----G 246

  Fly  1011 EGLDYVNAS--TITDHDPRAPAYVAAQGPLPSTLAHFWQMIWEQGAVVIVALCRLQENGEVACAR 1073
            :..||:|||  .|.:|:... .|:|.|||||.|:..||||:.|....||..:.|..|.|.:.|..
Mouse   247 KNKDYINASYIRIVNHEEEY-FYIATQGPLPETIEDFWQMVLENNCNVIAMITREIECGVIKCYS 310

  Fly  1074 YWP---EEGAEVYHIYEVHLVSEHIWCDDYLVRSFYLKNLRTSETRTVTQFHFLSWPHMGVPAQA 1135
            |||   :|..|..| :.|.|.:.|: ...:.||.|.:....|.:::.|....|..||..|.||.|
Mouse   311 YWPISLKEPLEFEH-FSVFLETFHV-TQYFTVRVFQIVKKSTGKSQCVKHLQFTKWPDHGTPASA 373

  Fly  1136 KALLDFRRKVNKSYRGRRSCPIVVHGSAGAGRTGVYILLDLVLERMNKGAREIDIAATLEHLRDQ 1200
            ...:.:.|.|.||:   .:.|::||.|||.|||||:|.:|:|...:.|. ...||...:..:|.|
Mouse   374 DFFIKYVRYVRKSH---ITGPLLVHCSAGVGRTGVFICVDVVFSAIEKN-YSFDIMNIVTQMRKQ 434

  Fly  1201 RAGVVATRQQFEFVLMAVAEEVHAIL 1226
            |.|::.|::|::|....|.|.:..:|
Mouse   435 RCGMIQTKEQYQFCYEIVLEVLQNLL 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IA-2NP_608562.4 Receptor_IA-2 705..795 CDD:463293
PTP_DSP_cys 942..1225 CDD:475123 95/293 (32%)
Ptpn20XP_006518791.1 PTP_DSP_cys 251..457 CDD:475123 76/212 (36%)
Blue background indicates that the domain is not in the aligned region.

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