DRSC/TRiP Functional Genomics Resources

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Protein Alignment IA-2 and F20H11.4

DIOPT Version :9

Sequence 1:NP_608562.4 Gene:IA-2 / 33277 FlyBaseID:FBgn0031294 Length:1319 Species:Drosophila melanogaster
Sequence 2:NP_498458.1 Gene:F20H11.4 / 175937 WormBaseID:WBGene00017647 Length:446 Species:Caenorhabditis elegans


Alignment Length:415 Identity:107/415 - (25%)
Similarity:187/415 - (45%) Gaps:73/415 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   910 SLSKENEGRPP------SSRSSTSSWSEEPALTNMDISTGHMVLSYMEDHLRNKGRLQREWEALC 968
            |.:::::.:||      :::....:|                   :..|.|..| :|.|::.|| 
 Worm    85 SKNRKSKMKPPPDTQELANKKKFCNW-------------------FFVDELDCK-KLMRDFVAL- 128

  Fly   969 RYEAEPSAREAASQPQCAGLNRPGAPLPYDHSRVVLNHLANAEGLDYVNASTITDHDPRAPAYVA 1033
               ..||...|.:..:.:...|....|..|.:||||.:  .....|:::|:.:|  .|....|::
 Worm   129 ---RAPSTCVADTMKKHSEKCRYYDILCPDATRVVLQN--RPPDNDFIHANWMT--MPDKFRYIS 186

  Fly  1034 AQGPLPSTLAHFWQMIWEQGAVVIVALCRLQENGEVACARYWPEEG--AEVYHIYEVHLVSEHIW 1096
            ||||:..|:..||.|::.:.|..:|.:|..:|:|...|:||.|.|.  :.|..||.:..:.:...
 Worm   187 AQGPMDQTVEDFWHMVYTEKAPAVVMICDWEEDGIQKCSRYIPSEDNISHVCGIYRITKIDQMTM 251

  Fly  1097 C-DDYLVRSFYL----KNLRTSETRTVTQFHFLSWPHMGVPAQAKALLDFRRKVNKSYRG-RRSC 1155
            . .|..::||.:    |:|. ..:..|..:|||.|.....|..:.::|    |:.|:.|. :|..
 Worm   252 VYADVALQSFEISVTDKSLE-CPSLVVKHYHFLKWRDHTAPMTSISVL----KLLKALRDPKRPG 311

  Fly  1156 PIVVHGSAGAGRTGVYILLDLVLERMNKGAREIDIAATLEHLRDQRAGVVATRQQFEFVLMAVAE 1220
            |.|:|.|||.|||...|.:|...:|:.: ..|:::...:..:|..|...|.:..||.|:||.:|:
 Worm   312 PPVIHCSAGIGRTATLIGVDYGNQRIGE-VGEMNVLDIVREMRQMRDKAVQSHHQFIFMLMCIAD 375

  Fly  1221 EVHAILKALPANTSGEKRELDKDPVVGGGSSSTT-TKEPLKEDKAQEAAEEEAPTSSSKAAAAAK 1284
            .:  :|..:|.|          |.::......|. .|:.|.|.|.::.||:            ||
 Worm   376 RM--VLDGVPQN----------DNMLDLADFYTEFMKKVLMERKKKDEAEK------------AK 416

  Fly  1285 KEKEKDKDKEEKQAKDQAKVAEPRT 1309
            ||||:.:.::|...|...|.|..:|
 Worm   417 KEKEEKRKRDEANDKTNEKSALSKT 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IA-2NP_608562.4 Receptor_IA-2 708..795 CDD:288410
PTPc 960..1220 CDD:214550 77/267 (29%)
PTPc 995..1220 CDD:238006 69/232 (30%)
F20H11.4NP_498458.1 Y_phosphatase 142..375 CDD:278528 70/242 (29%)
PTPc 144..375 CDD:238006 70/240 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3974
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.860

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