DRSC/TRiP Functional Genomics Resources

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Protein Alignment IA-2 and dep-1

DIOPT Version :10

Sequence 1:NP_608562.4 Gene:IA-2 / 33277 FlyBaseID:FBgn0031294 Length:1319 Species:Drosophila melanogaster
Sequence 2:NP_001254192.1 Gene:dep-1 / 174437 WormBaseID:WBGene00009717 Length:1367 Species:Caenorhabditis elegans


Alignment Length:460 Identity:128/460 - (27%)
Similarity:198/460 - (43%) Gaps:74/460 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   832 AAAVIVIFV----TLILIKRHDRKRDKLGGLQSGIAGAETCSKDYQ-ELCRARMA-------GKA 884
            |..:::.||    |:.|...:..|:.:|..  :......:..|:.| |..:..||       .|.
 Worm   904 AVLIVIAFVGIVGTIFLFFWNRTKKARLAA--AAFKNGPSKEKESQWEALKMMMAERAADCLAKL 966

  Fly   885 GGGGNSTGGAAGGGSNEPAPS-------GRITSLSKENEGRPPSSRSSTSSWSEEPALTNMDIST 942
            |....:...::...||.|..:       |....|...|.|....:||.......|..|..:....
 Worm   967 GLDATTPPPSSTTSSNSPTSTSTTMTDCGSNPHLGAPNAGGHRRTRSLRERTGVEHRLERLSSGP 1031

  Fly   943 GHMVLSY------------------MEDHLR-----NKGRLQREWEALCRYEAEPSAREAASQPQ 984
            .|....|                  ..||:|     :..|...|::.:.......|.  |||:  
 Worm  1032 VHRTPLYTVVTGANTNKSRPVRIEDFADHVRLMSADSDFRFSEEYDMMRNVGVGQSV--AASE-- 1092

  Fly   985 CAGLNRPG---APLP-YDHSRVVLNHLANAEGLDYVNASTITDHDPRAPAYVAAQGPLPSTLAHF 1045
             ..:|||.   ..:| ||||||.|::..|.||.||:||:.:.....|. .::|||||||:|..||
 Worm  1093 -LPINRPKNRFTNIPSYDHSRVKLSNPNNIEGGDYINANYVPGFSSRR-EFIAAQGPLPTTRDHF 1155

  Fly  1046 WQMIWEQGAVVIVALCRLQENGEVACARYWPE-EGAEV-YHIYEVHLVSEHIWCDDYLVRSFYLK 1108
            |||.|||....|:||.:..|.|...|.:|||: |...| |...||.:|:|..: |::::|...|:
 Worm  1156 WQMTWEQQCPAIIALTKCVEKGRDKCHQYWPDHENVPVLYGDIEVTIVAEKEF-DEFVIRDIRLE 1219

  Fly  1109 NLRTS--ETRTVTQFHFLSWPHMGVPAQAKALLDFRRKVNKSY-RGRRSCPIVVHGSAGAGRTGV 1170
            .....  .||.|..:|:::||..|.|:....::.|.|...... ....:.|.:||.|||.||:|.
 Worm  1220 KSGPDGRVTRFVRHWHYMAWPDFGAPSHPNGIIQFSRMFRHHLPHSPHNAPTIVHCSAGVGRSGT 1284

  Fly  1171 YILLDLVLERMNKGAREIDIAATLEHLRDQRAGVVATRQQFEFVLMAVAEEVHAILKAL------ 1229
            :|.:|.:|:..:.| ..||:..|:..:|.:|..:|...||:.|:       .:.||:.|      
 Worm  1285 FISIDRLLQSSSFG-DPIDVFGTVCEMRYERCQMVQNEQQYIFI-------HYCILQVLQGSSPS 1341

  Fly  1230 PANTS 1234
            |.:||
 Worm  1342 PTSTS 1346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IA-2NP_608562.4 Receptor_IA-2 705..795 CDD:463293
PTP_DSP_cys 942..1225 CDD:475123 97/314 (31%)
dep-1NP_001254192.1 FN3 640..736 CDD:238020
PTP_tm 770..>875 CDD:465889
PTPc 1072..1333 CDD:214550 92/275 (33%)
Blue background indicates that the domain is not in the aligned region.

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