DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tmtc2 and SWA2

DIOPT Version :10

Sequence 1:NP_608558.1 Gene:Tmtc2 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_010606.1 Gene:SWA2 / 851918 SGDID:S000002728 Length:668 Species:Saccharomyces cerevisiae


Alignment Length:523 Identity:93/523 - (17%)
Similarity:165/523 - (31%) Gaps:142/523 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   428 SSPVAQAPAQAPHLVSSAFRGSRSSSSCSNSTNSSSSSSSSSSSSSSSSSSLSGGFQCSSKDYAL 492
            |.|.|       ||::|.            ....|:|:|..::..||:|.|::|.   :..|.|.
Yeast     2 SDPFA-------HLLTSL------------KNKDSASASKETTPQSSNSPSITGS---AVADVAR 44

  Fly   493 EGMSPANR----HACVLIMS--LSFLALPFLPAS-----------------------NLLFYVGF 528
            ...||.:.    .|..||.|  :.|.|.|.:|.:                       |.||.:|.
Yeast    45 TDKSPNDSLHSISAPPLIPSPKVDFSAPPLVPTNSTTKSNTANNTPPSALANTDDDFNQLFGMGT 109

  Fly   529 VVAERLLYLPSVGFCLLVGYG---------------------VSKLMSCNQRTRNILLLSFSLLL 572
            |.....:..|...:     ||                     :::|||.............:.:.
Yeast   110 VTTTDTIQKPDEDY-----YGSKEDHLYNGDDALVDEVKDMEIARLMSLGLSIEEATEFYENDVT 169

  Fly   573 AAMSLRTLRRNADWRDEESLYRSAIAINPPKALGNLGSVLSSQGR---------YEEAKQVLQEA 628
            ....|..|:.....|::.::.:....|...|:  .|.:::.:...         :.:.|:::.:.
Yeast   170 YERYLEILKSKQKERNDLAIRKKESGIKMEKS--GLSNIVGTDSNNLFSMATDFFNKGKKLVDQW 232

  Fly   629 IRFRPNMADVHFNLGILHQNQQVY--PAAVECFQRAIKFRPNLAVAYL--------NLGISF--- 680
            ..|.|...|...|....|...:.|  |...:...| |.|..|..|..|        :|...|   
Yeast   233 TSFPPEANDRLNNYSKTHDKVEDYDLPQVNDSPNR-ILFEDNEVVENLPPADNPDQDLLTDFETK 296

  Fly   681 IALGKRQQAIEILQAGSNLDGAAVRDRTAHDQ--------------ARSSAYLQLGALYVEQGKL 731
            |.:.|| .|.::..:.|...|..:.:.:..::              ..:|...:...|:.|....
Yeast   297 IDITKR-TAPDVSHSSSPTSGILIEENSRRNEPLIEDSLLDFSEGNLTNSKSNEDSTLFNENSNT 360

  Fly   732 QRALAIYREALSSLPGLPQQREILYQRIGDVLGRLQQWDEA----ERHHRAALELQPNQVAAHLS 792
            ...:.|....||.......:...|::. ||.:..||:::::    ..:|...:....|.:|:.|.
Yeast   361 DSTIPISDIELSGYNEFKAKGTSLFKN-GDYINSLQEYEKSLNTLPLNHPLRIIALSNIIASQLK 424

  Fly   793 YG--ITLARNSSRA-----SEAEMWFKRALKLAPE-------------QASVYHHYAEFLSLQSR 837
            .|  .....|||.|     |....|..:.....||             :|..:.|...|......
Yeast   425 IGEYSKSIENSSMALELFPSSKAKWKNKISNSDPERSFNDIWPKIMIRRAESFEHLESFKKALET 489

  Fly   838 HHE 840
            :.|
Yeast   490 YQE 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc2NP_608558.1 TMTC_DUF1736 270..343 CDD:462468
TPR 597..852 CDD:440225 53/304 (17%)
TPR repeat 602..630 CDD:276809 3/36 (8%)
TPR repeat 635..665 CDD:276809 7/31 (23%)
TPR repeat 670..694 CDD:276809 8/34 (24%)
TPR repeat 715..743 CDD:276809 4/27 (15%)
TPR repeat 748..782 CDD:276809 6/37 (16%)
TPR 780..>933 CDD:440225 16/81 (20%)
TPR repeat 787..816 CDD:276809 9/35 (26%)
TPR repeat 822..850 CDD:276809 4/19 (21%)
TPR repeat 855..885 CDD:276809
TPR repeat 890..918 CDD:276809
SWA2NP_010606.1 Ubiq-assoc 138..181 CDD:401184 5/42 (12%)
TPR repeat 374..402 CDD:276809 5/28 (18%)
CpoB 383..496 CDD:441335 22/111 (20%)
TPR repeat 407..441 CDD:276809 9/33 (27%)
TPR repeat 467..495 CDD:276809 4/26 (15%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.