| Sequence 1: | NP_608558.1 | Gene: | Tmtc2 / 33276 | FlyBaseID: | FBgn0028481 | Length: | 938 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_051060.2 | Gene: | ycf3 / 844767 | -ID: | - | Length: | 168 | Species: | Arabidopsis thaliana |
| Alignment Length: | 180 | Identity: | 40/180 - (22%) |
|---|---|---|---|
| Similarity: | 74/180 - (41%) | Gaps: | 47/180 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 571 LLAAMSLRTLRRNADWRDEESLYRSAIAINPPKALGNLGSVLSSQGRYEEAKQVLQEAIRFRPNM 635
Fly 636 AD---VHFNLGILHQNQQVYPAAVECFQRAIKFRPNLAVAYLNLGISFIALGKRQQAIEILQAGS 697
Fly 698 NLDGAAVRDRTAHDQARSSAYLQLGALYVEQGKLQRALAIYREALSSLPG 747 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Tmtc2 | NP_608558.1 | TMTC_DUF1736 | 270..343 | CDD:462468 | |
| TPR | 597..852 | CDD:440225 | 35/154 (23%) | ||
| TPR repeat | 602..630 | CDD:276809 | 9/27 (33%) | ||
| TPR repeat | 635..665 | CDD:276809 | 8/32 (25%) | ||
| TPR repeat | 670..694 | CDD:276809 | 6/23 (26%) | ||
| TPR repeat | 715..743 | CDD:276809 | 4/27 (15%) | ||
| TPR repeat | 748..782 | CDD:276809 | 40/180 (22%) | ||
| TPR | 780..>933 | CDD:440225 | |||
| TPR repeat | 787..816 | CDD:276809 | |||
| TPR repeat | 822..850 | CDD:276809 | |||
| TPR repeat | 855..885 | CDD:276809 | |||
| TPR repeat | 890..918 | CDD:276809 | |||
| ycf3 | NP_051060.2 | ycf3 | 1..168 | CDD:176974 | 40/180 (22%) |
| TPR repeat | 35..65 | CDD:276809 | 12/42 (29%) | ||
| TPR repeat | 71..101 | CDD:276809 | 7/29 (24%) | ||
| TPR repeat | 106..141 | CDD:276809 | 10/53 (19%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||