DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc2 and TPR12

DIOPT Version :10

Sequence 1:NP_608558.1 Gene:Tmtc2 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_177936.1 Gene:TPR12 / 844148 AraportID:AT1G78120 Length:530 Species:Arabidopsis thaliana


Alignment Length:567 Identity:105/567 - (18%)
Similarity:186/567 - (32%) Gaps:208/567 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   422 GYVYEGSSPVAQAPA--QAPHLVSSAFRGSRSSSSCSN-------STNSSS-------------- 463
            |.:::..||..:.|:  :..|...... .|:||::.:|       ||::||              
plant    20 GCIFQSWSPRRRKPSLPEKDHRAKDNL-SSKSSTTVTNPKILPRKSTDTSSQPKKSDSQKPQQKP 83

  Fly   464 ---------SSSSSSSSSSSSSSSL-SGGFQCSSKDYALEGMSPANRHACVLIMSLSFLALPFLP 518
                     ||.|:..||.|:..|: ||..:..||.::|.|:                       
plant    84 KPDENHPRKSSESARKSSDSARKSISSGSSRTESKRFSLNGV----------------------- 125

  Fly   519 ASNLLFYVGFVVAERLLYLPSVGFCLLVGYGVSKLMSCNQRTRNILLLSFSLLLAAMSLRTLRRN 583
                   :|.::.:     |.                                 .|:.....:..
plant   126 -------MGNIIVK-----PQ---------------------------------PAVKTDVTQTK 145

  Fly   584 ADWRDEESLYRSAIAINPPKALGNLGSVLSSQGRYEEAKQVLQEAIRFRPNMADVHFNLGILHQN 648
            :.|..:...:|.     .|:.|..:|:....:||:.:                            
plant   146 SRWEGKPVNHRL-----DPETLKKMGNEEYCRGRFGQ---------------------------- 177

  Fly   649 QQVYPAAVECFQRAIKFRPNLAVAYLNLGISFIALGKRQQAIEILQAGSNLDGAAVRDRTAHDQA 713
                  |:..::|||...|.....:.|...:.|:||:..:|.:..:....|:....|        
plant   178 ------ALVFYERAISADPKTPTYWSNKSAALISLGRLLEASDACEEALRLNPTYER-------- 228

  Fly   714 RSSAYLQLGALYVEQGKLQRALAIYREALSSLPGLPQQREILYQRIGDVLGRLQQWDEAERHHRA 778
               |:.:|.:|.:..|::::||..|.||     |...:.:.: :::.||:..|::.|||.|....
plant   229 ---AHQRLASLQLRLGEVEKALCHYNEA-----GKYTETKHI-EQVEDVVKCLRRCDEARRSKEW 284

  Fly   779 ALELQPNQVAAHLSYGITLARNSSRASEAEMWFKRALKLAPEQASVYHHYAEFLSLQSRHHESAI 843
            .:.|:....|  :|||   |.:|.|                    ||....|.|....||.|:..
plant   285 NVALKETLFA--ISYG---ADSSPR--------------------VYALQTEALLHLQRHEEAYS 324

  Fly   844 YHRRAAE------------LAPNDYTLVVAAATAMRLLDRKVDAEMWYRKAVALRPGD------- 889
            .:::..:            |:...|.|:|.|...: .:.|..||....|:|..|.|..       
plant   325 VYQKGTKRFDIDSFIKIFGLSLTSYLLMVGAQVYI-AVGRFEDAVTASRQAARLDPSSEEVNAVA 388

  Fly   890 ----AHAHTNL-GAILHLLGRTNHAAASYKAALRLQPGDAITLGNLA 931
                |.|...| |.:|....:...|:..|...|...|.:|:.|.|.|
plant   389 RKARAVASARLSGNLLFNASKFEGASVVYTEGLENDPYNALLLCNRA 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc2NP_608558.1 TMTC_DUF1736 270..343 CDD:462468
TPR 597..852 CDD:440225 49/266 (18%)
TPR repeat 602..630 CDD:276809 5/27 (19%)
TPR repeat 635..665 CDD:276809 4/29 (14%)
TPR repeat 670..694 CDD:276809 5/23 (22%)
TPR repeat 715..743 CDD:276809 9/27 (33%)
TPR repeat 748..782 CDD:276809 7/33 (21%)
TPR 780..>933 CDD:440225 40/176 (23%)
TPR repeat 787..816 CDD:276809 7/28 (25%)
TPR repeat 822..850 CDD:276809 7/27 (26%)
TPR repeat 855..885 CDD:276809 9/29 (31%)
TPR repeat 890..918 CDD:276809 7/28 (25%)
TPR12NP_177936.1 LapB 155..385 CDD:442196 62/311 (20%)
TPR repeat 159..187 CDD:276809 8/61 (13%)
TPR repeat 192..222 CDD:276809 5/29 (17%)
TPR repeat 227..253 CDD:276809 8/36 (22%)
TPR 303..>486 CDD:440225 33/154 (21%)
TPR repeat 427..457 CDD:276809 4/9 (44%)
TPR repeat 462..486 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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