DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc2 and AT1G05150

DIOPT Version :10

Sequence 1:NP_608558.1 Gene:Tmtc2 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_172007.1 Gene:AT1G05150 / 839312 AraportID:AT1G05150 Length:808 Species:Arabidopsis thaliana


Alignment Length:174 Identity:56/174 - (32%)
Similarity:82/174 - (47%) Gaps:25/174 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   593 YRSAIAINPP--KALGNLGSVLSSQGRYEEAKQVLQEAIRFRPNMADVHFNLGILHQNQQVYPAA 655
            ||.|..:.|.  :||..|||.|...|.|..|.:.|:|||..:|:.||.|.:|.....:......|
plant   333 YREAAILCPTHFRALKLLGSALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHSMGEDERA 397

  Fly   656 VECFQRAIKFRPNLAVAYLNLGISFIALGKRQQAIE----ILQAGSNLDGAAVRDRTAHDQAR-S 715
            :|.|||||..:|....|..|||..::.||:.|:|.|    :|....|           |.:|: :
plant   398 IEVFQRAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLTVWPN-----------HWRAQLN 451

  Fly   716 SAYLQLGALYVEQGK--LQRALAI-----YREALSSLPGLPQQR 752
            .|...|||...|:.|  |:.||.:     ..:|:|.|..|.:::
plant   452 KAVSLLGAGETEEAKRALKEALKLTNRVELHDAISHLKHLQKKK 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc2NP_608558.1 TMTC_DUF1736 270..343 CDD:462468
TPR 597..852 CDD:440225 53/170 (31%)
TPR repeat 602..630 CDD:276809 12/29 (41%)
TPR repeat 635..665 CDD:276809 11/29 (38%)
TPR repeat 670..694 CDD:276809 9/27 (33%)
TPR repeat 715..743 CDD:276809 10/34 (29%)
TPR repeat 748..782 CDD:276809 1/5 (20%)
TPR 780..>933 CDD:440225
TPR repeat 787..816 CDD:276809
TPR repeat 822..850 CDD:276809
TPR repeat 855..885 CDD:276809
TPR repeat 890..918 CDD:276809
AT1G05150NP_172007.1 EF-hand_7 9..81 CDD:463900
TPR repeat 237..262 CDD:276809
PilF 243..345 CDD:442297 4/11 (36%)
TPR repeat 267..297 CDD:276809
TPR 309..>485 CDD:440225 52/162 (32%)
TPR repeat 310..338 CDD:276809 3/4 (75%)
TPR repeat 345..372 CDD:276809 12/26 (46%)
TPR repeat 377..407 CDD:276809 11/29 (38%)
TPR repeat 412..439 CDD:276809 9/26 (35%)
TPR repeat 446..474 CDD:276809 9/27 (33%)
ZZ 737..>768 CDD:412288
Blue background indicates that the domain is not in the aligned region.

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