DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tmtc2 and AT5G63200

DIOPT Version :10

Sequence 1:NP_608558.1 Gene:Tmtc2 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_201125.2 Gene:AT5G63200 / 836441 AraportID:AT5G63200 Length:649 Species:Arabidopsis thaliana


Alignment Length:579 Identity:120/579 - (20%)
Similarity:208/579 - (35%) Gaps:173/579 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   451 SSSSCSNSTNSSSSSSSSSSSSSSSSSSLSGGFQCSSKDYALEGMSPANRHACVLIMSLSF---- 511
            |||.|....:...::....:|.....|:|..|.      ..:....|.|.|| ..|:.|.|    
plant    97 SSSDCGVDADGDLANQGVPASREEKISNLKMGL------IHVARKMPKNAHA-HFILGLMFQRLG 154

  Fly   512 ---LALP-FLPASNLLFYVGFVVAE-RLLYLPSV--GFCLLV-GYG----------------VSK 552
               .|:| :..|..:|......:|. .||.|..:  |.|||: |:|                :||
plant   155 QSQKAIPEYEKAEEILLGCEPEIARPELLLLVQIHHGQCLLLDGFGDTDSVKELEGEELEEILSK 219

  Fly   553 L-----MSCNQ----RTRNILLLSFSLLLAAMSLRTLRRNADWRDEESLYRSAIAINPPK--ALG 606
            |     :...|    .|..::||....|::|:|:.:               |.:|:.|..  .|.
plant   220 LKDSIKLDVRQAAVWNTLGLMLLKAGCLMSAISVLS---------------SLLALVPDNYDCLA 269

  Fly   607 NLGSVLSSQGRYEEAKQVLQEAI-------------------RFRPNMADVHFNLGILHQNQQVY 652
            |||......|..|.:.:..|:.:                   :....:|....|.|......|..
plant   270 NLGVAYLQSGDMELSAKCFQDLVLKDHNHPAALINYAAELLCKHSSTVAGAGANGGADASEDQKA 334

  Fly   653 P--AAVECFQRAIKFRPNLAVAYLNLGISFIALGKRQQAIEILQAGSNLD--------GAAV--- 704
            |  .|.||...|::..|..|.|::||..|:..:|..:.:.:.|:..:.||        ..||   
plant   335 PMNVAKECLLAALRSDPKSAHAWVNLANSYYMMGDHRSSSKCLEKAAKLDPNCMATRFAVAVQRI 399

  Fly   705 ----RDRTAHDQ-------------------------------ARSSAYLQLGALYVEQGKL--- 731
                |.:.|.||                               |..:.:....|...::.:|   
plant   400 KDAERSQDASDQLSWAGNEMASVIREGESVPIDPPIAWAGLAMAHKAQHEIAAAFVADRNELTEM 464

  Fly   732 -QRALAIYREALSSLPGLPQQREILYQRIGDVLGRL--QQWDEAERHHRAALELQPNQVAAHLSY 793
             :||:...::|::..|    :..:.:.::|  |..|  ||:..::::.:||:........|..:.
plant   465 EERAVYSLKQAVTEDP----EDAVRWHQLG--LHSLCSQQYKLSQKYLKAAVGRSRECSYAWSNL 523

  Fly   794 GITLARNSSRASEAEMWFKRALKLAPEQASVYHHYAEFLSLQSRHHESAIYHRRAAELAPNDYTL 858
            ||:| :.|...||||..:||||.::.|..:    :|...:|.:.:.:...|.             
plant   524 GISL-QLSDEHSEAEEVYKRALTVSKEDQA----HAILSNLGNLYRQKKQYE------------- 570

  Fly   859 VVAAATAMRLLDRKVDAEMWYRKAVALRPGDAHAHTNLGAILHLLGRTNHAAASYKAAL 917
               .:.||            :.||:.|:||.|.|:.|||.:.....|...|.:.::.:|
plant   571 ---VSKAM------------FSKALELKPGYAPAYNNLGLVFVAERRWEEAKSCFEKSL 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc2NP_608558.1 TMTC_DUF1736 270..343 CDD:462468
TPR 597..852 CDD:440225 65/329 (20%)
TPR repeat 602..630 CDD:276809 7/48 (15%)
TPR repeat 635..665 CDD:276809 9/31 (29%)
TPR repeat 670..694 CDD:276809 6/23 (26%)
TPR repeat 715..743 CDD:276809 5/31 (16%)
TPR repeat 748..782 CDD:276809 7/35 (20%)
TPR 780..>933 CDD:440225 32/138 (23%)
TPR repeat 787..816 CDD:276809 12/28 (43%)
TPR repeat 822..850 CDD:276809 3/27 (11%)
TPR repeat 855..885 CDD:276809 4/29 (14%)
TPR repeat 890..918 CDD:276809 8/28 (29%)
AT5G63200NP_201125.2 PEP_TPR_lipo <137..615 CDD:274350 112/533 (21%)
TPR repeat 231..259 CDD:276809 7/42 (17%)
TPR repeat 265..293 CDD:276809 7/27 (26%)
TPR repeat 298..349 CDD:276809 9/50 (18%)
TPR repeat 354..382 CDD:276809 7/27 (26%)
Spy 402..>628 CDD:443119 50/252 (20%)
TPR repeat 483..511 CDD:276809 7/29 (24%)
TPR repeat 517..545 CDD:276809 12/28 (43%)
TPR repeat 550..582 CDD:276809 7/63 (11%)
TPR repeat 587..615 CDD:276809 8/28 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.