DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc2 and TOC64-V

DIOPT Version :10

Sequence 1:NP_608558.1 Gene:Tmtc2 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_196504.2 Gene:TOC64-V / 830801 AraportID:AT5G09420 Length:603 Species:Arabidopsis thaliana


Alignment Length:448 Identity:94/448 - (20%)
Similarity:161/448 - (35%) Gaps:77/448 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   446 FRGSRSS-SSCSNSTNSSSSSSSSSSSSSSSSSSLSGGFQCSSKDYALEGMSP-ANRHACVLIMS 508
            ||.|:.: ||.....||.|..:....:|..|.....|        :||..:|. .:|....||.:
plant   193 FRPSQGTVSSVGVLPNSQSLETVGWFASDPSVLCQVG--------HALLNLSAVTHRRQRSLIFA 249

  Fly   509 LSFLALPFLP-----------ASNLLFY-------VGFVVAERLLYLPSVG-FCLLVGYGVSKLM 554
            .....|..:|           ..||..|       ||..||..   :||:. ||...|.      
plant   250 DDLFELSDIPKQKSVQVVRKAIENLSGYKTPKHVNVGQYVASN---VPSLAEFCEQSGK------ 305

  Fly   555 SCNQRTRNILLLSFSLLLAAMSLRTLRRNADWRDEESLYRSAIAINPPKALGNLGSVLSSQGRYE 619
              :|.:.:.|....|::||      ::|:....:.|..:::..:...|:...::.:.|.|:.  |
plant   306 --SQNSASTLRALSSVMLA------IQRHEFKTNHEEWWQTCKSFLGPRFSNDVVTALKSKN--E 360

  Fly   620 EAKQVLQEAIRFRPNMADVHFNLGILHQNQQVYPAAVECFQRAIKFRPNLAVAYLN--LGISFIA 682
            ..|.:.:.....|..:..:....|||     |.|...:...|....|......:|:  ..:|.||
plant   361 SIKSLYRVKNEMRATIQSLLKEDGIL-----VIPTVADPPPRLNTKRNKSLNEFLDRTYALSCIA 420

  Fly   683 --LGKRQQAIEILQAGSNLDGAAVRDRTAHDQARSSAYLQLGALYVEQGKLQRALAIYREALSSL 745
              .|..|..|.:.:.|......::......|:......|.:.|...:|.||...||    .:|..
plant   421 SMSGCCQVTIPLGEHGDRPISVSLLTYYGGDKFLLDTTLDVYASLQDQAKLASNLA----PVSDT 481

  Fly   746 PGLPQQREILYQRIGDVLGRLQQWDEAERHHRAALELQP-------NQVAAHLSYGITLARNSSR 803
            .|..:..|::.:: |:...:.:||::|...:..|::|..       |:.||.|..        ..
plant   482 NGNMEASEVMKEK-GNAAYKGKQWNKAVNFYTEAIKLNGANATYYCNRAAAFLEL--------CC 537

  Fly   804 ASEAEMWFKRALKLAPEQASVYHHYAEFLSLQSRHHESAIYHRRAAELAPNDYTLVVA 861
            ..:||....:|:.:..:....|...........|:.|:|...|.|..|.|.:.|..||
plant   538 FQQAEQDCTKAMLIDKKNVKAYLRRGTARESLVRYKEAAADFRHALVLEPQNKTAKVA 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc2NP_608558.1 TMTC_DUF1736 270..343 CDD:462468
TPR 597..852 CDD:440225 51/265 (19%)
TPR repeat 602..630 CDD:276809 5/27 (19%)
TPR repeat 635..665 CDD:276809 6/29 (21%)
TPR repeat 670..694 CDD:276809 7/27 (26%)
TPR repeat 715..743 CDD:276809 7/27 (26%)
TPR repeat 748..782 CDD:276809 6/33 (18%)
TPR 780..>933 CDD:440225 19/89 (21%)
TPR repeat 787..816 CDD:276809 6/28 (21%)
TPR repeat 822..850 CDD:276809 6/27 (22%)
TPR repeat 855..885 CDD:276809 3/7 (43%)
TPR repeat 890..918 CDD:276809
TOC64-VNP_196504.2 Amidase 43..465 CDD:450241 62/303 (20%)
TPR repeat 488..516 CDD:276809 6/28 (21%)
TPR 495..>592 CDD:440225 21/104 (20%)
TPR repeat 521..551 CDD:276809 7/37 (19%)
TPR repeat 556..583 CDD:276809 5/26 (19%)
Blue background indicates that the domain is not in the aligned region.

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