DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4341 and Tmtc4

DIOPT Version :9

Sequence 1:NP_608558.1 Gene:CG4341 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_001347527.1 Gene:Tmtc4 / 70551 MGIID:1921050 Length:741 Species:Mus musculus


Alignment Length:967 Identity:240/967 - (24%)
Similarity:367/967 - (37%) Gaps:307/967 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPSLEPWLWGDSCSWLGMLAMLRLRLHKSNMDFTCLFCCSLAFVLYLNTLGAGFVYDDRRAILAN 65
            :||:.|..|.                 |..:.|..|.|       :..:....||:||..||:.|
Mouse    12 VPSVLPPFWA-----------------KLVVGFVSLLC-------FARSYDGDFVFDDSEAIVNN 52

  Fly    66 ADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLCVLSFRLNYLIGGGFAPWGFHLVNNLLHCVA 130
            .|:...||....:.:||||:.|:.:.||.|:|||.||:||:||.:.|||.|.|||:||.|||...
Mouse    53 KDLQSDTPLGDLWHHDFWGSKLSSNTSHKSYRPLTVLTFRINYYLSGGFHPVGFHVVNILLHGSI 117

  Fly   131 TALVVRVARTLLASVW-------------AVLAAGALFAAHPIHTEAVAGVVGRADLAACVCYLL 182
            :.|::.|...|...:.             |.|.|..|||.||:|||.||||||||||...:.:||
Mouse   118 SILMLDVFSVLFGGLQYTGKGQRVHLAPRASLLATLLFAVHPVHTECVAGVVGRADLLCALFFLL 182

  Fly   183 TYLSYLRHMRWRESGDPRQ------WLALGATLILAAAGLLCKETAITALLVCALFDVMRGLSGQ 241
            ::|.|.:  .::|:|:...      |:.|  ::.|.|..:||||..||.|.:.|:||::  :.|:
Mouse   183 SFLGYCQ--AFKETGNKEGTHSSTFWVLL--SIFLGAVAMLCKEQGITVLGLNAVFDIL--VIGK 241

  Fly   242 VDKQRLRSVCIVL---------------GALF----------CMAYCRLVIVPGPQTAFSSADNP 281
            :|  .|.:|..||               |.||          .|.|.|..|:.....||:..|||
Mouse   242 LD--ILAAVRKVLHKDKSQENAGMFKNGGLLFRIALLTIGGTSMLYIRWKIMGTGPPAFTEVDNP 304

  Fly   282 IARTPSAWTRLLTFLYLPVFNLRLLLQPNVLSFDWGMDALPRVTSLWDRRNAQSACFYSVLVGVA 346
            .:...|...|.:.:.|....|..|||.|..|.|||.|..:|.:.|:.|.|....|..:..|:|: 
Mouse   305 ASFADSMLVRAINYNYYYSLNAWLLLCPWWLCFDWSMGCIPLIKSVGDWRVIALAALWLCLIGL- 368

  Fly   347 WGSCRQLLSGSKEVTHCGVSSTFPQYHIQKVASRKSRSKRKRLANNTKYQAFEAAYHQQQQEALP 411
                                                                             
Mouse   369 ----------------------------------------------------------------- 368

  Fly   412 CRDCNNNNSSGYVYEGSSPVAQAPAQAPHLVSSAFRGSRSSSSCSNSTNSSSSSSSSSSSSSSSS 476
                                             .|:...|..||...                  
Mouse   369 ---------------------------------IFQALCSEDSCKRR------------------ 382

  Fly   477 SSLSGGFQCSSKDYALEGMSPANRHACVLIMSLSFLALPFLPASNLLFYVGFVVAERLLYLPSVG 541
                                       :|.:.|.||.:||||||||.|.||||||||:|||||.|
Mouse   383 ---------------------------ILTLGLGFLVIPFLPASNLFFRVGFVVAERVLYLPSAG 420

  Fly   542 FCLLVGYGVSKLMSCNQRTRNILLLSFSLLLAAMSLRTLRRNADWRDEESLYRSAIAINP--PKA 604
            :|:|:.:|...|....::.:.:..:...:|| ..:||.:.|:.:||.||.|:|||:::.|  .|.
Mouse   421 YCVLLTFGFGALSRHTKKKKPVAAIILGILL-INALRCVIRSGEWRSEEQLFRSALSVCPLNAKV 484

  Fly   605 LGNLGSVLSSQGRYEEAKQVLQEAIRFRPNMADVHFNLGILHQNQQVYPAAVECFQRAIKFRPNL 669
            ..|:|..|:.||....|.:..:||:|..|.......|||.:.:.:.....|.|....|::.:|:.
Mouse   485 HYNIGKNLADQGNQTAAIKYYREAVRLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQPDF 549

  Fly   670 AVAYLNLGISFIALGKRQQAIEILQAGSNLDGAAVRDRTAHDQARSSAYLQLGALYVEQGKLQRA 734
            |.|::||||                                                        
Mouse   550 AAAWMNLGI-------------------------------------------------------- 558

  Fly   735 LAIYREALSSLPGLPQQREILYQRIGDVLGRLQQWDEAERHHRAALELQPNQVAAHLSYGITLAR 799
                                       |...|::::|||:.:|.|::.:......:.:.|...|.
Mouse   559 ---------------------------VQNSLKRFEEAEQSYRTAIKHRRKYPDCYYNLGRLYAD 596

  Fly   800 NSSRASEAEMWFKRALKLAPEQASVYHHYAEFLSLQSRHHESAIYHRRAAELAPNDYTLVVAAAT 864
            .:........| :.|..|.||.:..:::....|.......::....|.|.:|.|||::|:.:.|.
Mouse   597 LNRHVDALNAW-RNATVLKPEHSLAWNNMIILLDNTGNLAQAEAVGREALQLIPNDHSLMFSLAN 660

  Fly   865 AMRLLDRKVDAEMWYRKAVALRPGDAHAHTNLGAILHLLGRTNHAAASYKAALRLQP 921
            .:....:..::|..:.||:...|..|..|.||..:.|..|..:.|...|:.:|:|.|
Mouse   661 VLGKSQKYKESEALFLKAIKANPNVASYHGNLAVLYHRWGHLDSAKKHYEISLQLDP 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4341NP_608558.1 PMT_2 112..>232 CDD:304453 54/138 (39%)
DUF1736 275..343 CDD:285594 22/67 (33%)
TPR_11 602..667 CDD:290150 17/64 (27%)
TPR_1 602..634 CDD:278916 10/31 (32%)
TPR repeat 602..630 CDD:276809 9/27 (33%)
TPR repeat 635..665 CDD:276809 6/29 (21%)
TPR_11 636..700 CDD:290150 13/63 (21%)
TPR_1 636..668 CDD:278916 6/31 (19%)
TPR repeat 670..694 CDD:276809 6/23 (26%)
TPR_11 714..784 CDD:290150 7/69 (10%)
TPR repeat 715..743 CDD:276809 0/27 (0%)
TPR repeat 748..782 CDD:276809 7/33 (21%)
TPR_11 755..819 CDD:290150 12/63 (19%)
TPR repeat 787..816 CDD:276809 4/28 (14%)
TPR_11 821..887 CDD:290150 12/65 (18%)
TPR repeat 822..850 CDD:276809 3/27 (11%)
TPR repeat 855..885 CDD:276809 6/29 (21%)
TPR_11 <874..921 CDD:290150 14/46 (30%)
TPR repeat 890..918 CDD:276809 8/27 (30%)
Tmtc4NP_001347527.1 DUF1736 292..366 CDD:369859 23/73 (32%)
TPR 1 448..481 14/33 (42%)
TPR 481..717 CDD:223533 61/319 (19%)
TPR 2 482..515 11/32 (34%)
TPR repeat 482..510 CDD:276809 9/27 (33%)
TPR repeat 515..545 CDD:276809 6/29 (21%)
TPR 3 517..549 7/31 (23%)
TPR 4 550..583 13/115 (11%)
TPR repeat 550..578 CDD:276809 13/110 (12%)
TPR 5 584..617 6/33 (18%)
TPR repeat 584..610 CDD:276809 3/26 (12%)
TPR repeat 618..646 CDD:276809 3/27 (11%)
TPR 6 619..651 5/31 (16%)
TPR repeat 651..681 CDD:276809 6/29 (21%)
TPR 7 652..685 6/32 (19%)
TPR 8 686..719 11/32 (34%)
TPR repeat 686..714 CDD:276809 8/27 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1320023at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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