DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4341 and Ifit3b

DIOPT Version :9

Sequence 1:NP_608558.1 Gene:CG4341 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:XP_006527327.1 Gene:Ifit3b / 667370 MGIID:3698419 Length:428 Species:Mus musculus


Alignment Length:265 Identity:60/265 - (22%)
Similarity:105/265 - (39%) Gaps:63/265 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   616 GRYEEAKQVLQEAIRFRP-------NMADVHFNLGILHQNQQVYPAAVECFQRAIKFRP-NLAVA 672
            ||.|.||...::|:..:|       .||...|.|....:.|    .:|:..::|::..| |..|.
Mouse   175 GRNERAKMCFEKALEEKPKDPECSSGMAIAMFRLEEKPEKQ----FSVDALKQAMELNPQNQYVK 235

  Fly   673 YLNLGISFIALGKRQQAIEILQAGSNLDG-AAVRDRTAHDQARSSAYLQLGALYVEQGKLQRALA 736
            .|             .|:::|:.|...:| ..::|.......::....:....|.::|.|.||:.
Mouse   236 VL-------------LALKLLRMGEEAEGERLIKDALGKAPNQTDVLQKAAQFYKKKGNLDRAIE 287

  Fly   737 IYREALSSLPGLPQQREILYQRIGDVLGRLQ---QWDEAERHHRAA----LELQPNQVAAHLSYG 794
            :..:||.|.........::..|..::|.:||   ..|.:||..|.|    |.::..|.       
Mouse   288 LLGKALRSTVNNSPLYSLVMCRYREILEQLQNKGDADSSERRQRMAELRRLTMEFMQK------- 345

  Fly   795 ITLARNSSRAS---------EAEMWFKRAL-KLAP--EQASVYHHYAEFLSLQSRHHESAIYHRR 847
             ||.|..|..:         |.|..::..: |.:|  |:..:|..|.   :||.       |||:
Mouse   346 -TLQRRRSPLNSYSDLIDFPEVERCYQMVISKESPDVEEEDLYERYC---NLQE-------YHRK 399

  Fly   848 AAELA 852
            :.:||
Mouse   400 SEDLA 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4341NP_608558.1 PMT_2 112..>232 CDD:304453
DUF1736 275..343 CDD:285594
TPR_11 602..667 CDD:290150 14/57 (25%)
TPR_1 602..634 CDD:278916 7/24 (29%)
TPR repeat 602..630 CDD:276809 6/13 (46%)
TPR repeat 635..665 CDD:276809 7/29 (24%)
TPR_11 636..700 CDD:290150 13/64 (20%)
TPR_1 636..668 CDD:278916 7/32 (22%)
TPR repeat 670..694 CDD:276809 3/23 (13%)
TPR_11 714..784 CDD:290150 18/76 (24%)
TPR repeat 715..743 CDD:276809 6/27 (22%)
TPR repeat 748..782 CDD:276809 10/40 (25%)
TPR_11 755..819 CDD:290150 18/80 (23%)
TPR repeat 787..816 CDD:276809 6/38 (16%)
TPR_11 821..887 CDD:290150 9/32 (28%)
TPR repeat 822..850 CDD:276809 7/27 (26%)
TPR repeat 855..885 CDD:276809
TPR_11 <874..921 CDD:290150
TPR repeat 890..918 CDD:276809
Ifit3bXP_006527327.1 TPR repeat 76..104 CDD:276809
PEP_TPR_lipo <81..>325 CDD:274350 35/166 (21%)
TPR repeat 109..148 CDD:276809
TPR repeat 161..189 CDD:276809 6/13 (46%)
TPR repeat 194..227 CDD:276809 7/36 (19%)
TPR repeat 266..294 CDD:276809 6/27 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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