DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4341 and tmtc1

DIOPT Version :9

Sequence 1:NP_608558.1 Gene:CG4341 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:XP_001922025.3 Gene:tmtc1 / 555449 ZFINID:ZDB-GENE-070705-219 Length:872 Species:Danio rerio


Alignment Length:1010 Identity:283/1010 - (28%)
Similarity:418/1010 - (41%) Gaps:299/1010 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 CLFCCSLAFVLYLNTLGAGFVYDDRRAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPL 99
            |..|       |.|:|...||:||..||..|.||..|:..:..|:|||||..:.|:.||.|:|||
Zfish    41 CALC-------YSNSLWGEFVHDDIWAITNNPDVKPGSSLRSIFTNDFWGKRMADNTSHKSYRPL 98

  Fly   100 CVLSFRLNYLIGGGFAPWGFHLVNNLLHCVATALVVRVARTLL--ASVWAVLAAGALFAAHPIHT 162
            |:|:|:||.|: ||..|:.|||||..||||.|||::...:..:  .|.::.|.| .||:.|||||
Zfish    99 CILTFKLNILL-GGLTPFFFHLVNVFLHCVVTALLMYTCQQCVFEDSNFSFLTA-LLFSVHPIHT 161

  Fly   163 EAVAGVVGRADLAACVCYLLTYLSYLRHMRWRESGDPRQ-----WLALGATLILAAAGLLCKETA 222
            |||:|:|||||:.|.:.:||.:|||:|.:....|.|...     | :|..:|:|....:|.|||.
Zfish   162 EAVSGIVGRADVLASMLFLLAFLSYIRSVSPIRSADEFPPTVCVW-SLALSLLLGTCAMLVKETG 225

  Fly   223 ITALLVCALFD--------VMRGLS-------GQVDKQRLRSVCIVLGALFCMAYCRLVIVPGPQ 272
            :|...||.|:|        ::..||       |::....::..|:|...:..:...||.::.|..
Zfish   226 VTVFGVCVLYDFLVLCRKPLILHLSRSRLKELGRISSPFVKRACVVSLHVTVIMSVRLWLMGGSM 290

  Fly   273 TAFSSADNPIARTPSAWTRLLTFLYLPVFNLRLLLQPNVLSFDWGMDALPRVTSLWDRRNAQSAC 337
            ..||..|||.:.:|...||.||:.||..||..|||.|.:|.:||.:.::|.|.||||.||..|..
Zfish   291 PLFSEQDNPASFSPYLLTRFLTYCYLLAFNAWLLLAPIMLCYDWQVGSIPLVESLWDGRNIASLT 355

  Fly   338 FYSVLVGVAWG--SCRQLLSGSKEVTHCGVSSTFPQYHIQKVASRKSRSKRKRLANNTKYQAFEA 400
            ...|::.::..  :|.|.:.| |||                                        
Zfish   356 LALVMLALSLNCVTCLQKMKG-KEV---------------------------------------- 379

  Fly   401 AYHQQQQEALPCRDCNNNNSSGYVYEGSSPVAQAPAQAPHLVSSAFRGSRSSSSCSNSTNSSSSS 465
                                                                             
Zfish   380 ----------------------------------------------------------------- 379

  Fly   466 SSSSSSSSSSSSSLSGGFQCSSKDYALEGMSPANRHACVLIMSLSFLALPFLPASNLLFYVGFVV 530
                                                    ::.|.||..||:|||||.|.|||||
Zfish   380 ----------------------------------------LVGLLFLVFPFIPASNLFFRVGFVV 404

  Fly   531 AERLLYLPSVGFCLLVGYGVSKLMSCNQR-TRNILLLSFSLLLAAMSLRTLRRNADWRDEESLYR 594
            |||:||:||:|:|:||.:|:::|.|...| ....|.:|..::|...|.:|:::|..|...|:|:|
Zfish   405 AERVLYMPSMGYCILVVHGLNRLYSVVSRWGAAALTVSMLVVLLLFSWKTVQQNEIWLSREALFR 469

  Fly   595 SAIAINP--PKALGNLGSVLSSQGRYEEAKQVLQEAIRFRPNMADVHFNLGIL-HQNQ--QVYPA 654
            |.|...|  .|...|..:.|..:||.:||....:.|:|..|..|....|||.| ||.:  :||  
Zfish   470 SGIQTLPHNAKVHYNYANFLKDKGRNQEAIYHYKTALRLYPRHASALNNLGTLTHQAEEAEVY-- 532

  Fly   655 AVECFQRAIKFRPNLAVAYLNLGISFIALGKRQQAIEILQAGSNLDGAAVRDRTAHDQARSSAYL 719
                ::||:...|....|..|||....:.||.::|..:|:..... |....|          ||.
Zfish   533 ----YRRALDINPQHNRALFNLGNLLKSQGKEEEAERMLKESIRF-GPHFAD----------AYS 582

  Fly   720 QLGALYVEQGKLQRALAIYREALSSLPGLPQQREILYQRIGDVLGRLQQWDEAERHHRAALELQP 784
            .|.:||.:||..:.|..||.:.:.:.|    :...|:...|..|....:.|.|..|::.|:.|:|
Zfish   583 SLASLYADQGHSKEANEIYTKGIENCP----ESSDLHNNYGVFLVDTGRGDRAAFHYQEAVRLKP 643

  Fly   785 NQVAAHLSYGITLARNSSRASEAEMWFKRALK-------LAPEQASVYHHYAEFLSLQSRHHESA 842
            ....|.::.| .|.|:|:...|||:|:||||:       |.|..|..|:        ..|:.|:.
Zfish   644 AHYVAMVNLG-RLLRSSNDNKEAELWYKRALQVVRKVDILTPLGALYYN--------TGRYEEAL 699

  Fly   843 IYHRRAAELAPNDYTLVVAAATAMRLLDRKVDAEMW----------------------------- 878
            ..:|.|:.|.|:...:.:|.|..:.:..|..:||..                             
Zfish   700 EVYREASTLQPDSTDIWLALAQVLAMAGRSTEAEKMTLGIISKTSNCIECYRLLSAIYSKQGNHT 764

  Fly   879 -------------------------------------------YRKAVALRPGDAHAHTNLGAIL 900
                                                       |:.||.|:|..:.|..|:|.|.
Zfish   765 EALDALKTALQQESSEPAVRAELHFSMGNQLREMNELDRAFQSYKLAVELKPEQSQAWMNMGGIQ 829

  Fly   901 HLLGRTNHAAAS--YKAALRLQPGDAITLGNLAKL 933
            |:.|  ::|||.  |:.||.|.|...:...|||||
Zfish   830 HIKG--DYAAARMYYQRALLLSPDSKLLKENLAKL 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4341NP_608558.1 PMT_2 112..>232 CDD:304453 54/126 (43%)
DUF1736 275..343 CDD:285594 31/67 (46%)
TPR_11 602..667 CDD:290150 21/67 (31%)
TPR_1 602..634 CDD:278916 9/31 (29%)
TPR repeat 602..630 CDD:276809 8/27 (30%)
TPR repeat 635..665 CDD:276809 11/32 (34%)
TPR_11 636..700 CDD:290150 20/66 (30%)
TPR_1 636..668 CDD:278916 11/34 (32%)
TPR repeat 670..694 CDD:276809 7/23 (30%)
TPR_11 714..784 CDD:290150 19/69 (28%)
TPR repeat 715..743 CDD:276809 10/27 (37%)
TPR repeat 748..782 CDD:276809 7/33 (21%)
TPR_11 755..819 CDD:290150 23/70 (33%)
TPR repeat 787..816 CDD:276809 12/28 (43%)
TPR_11 821..887 CDD:290150 17/137 (12%)
TPR repeat 822..850 CDD:276809 6/27 (22%)
TPR repeat 855..885 CDD:276809 8/101 (8%)
TPR_11 <874..921 CDD:290150 20/120 (17%)
TPR repeat 890..918 CDD:276809 11/29 (38%)
tmtc1XP_001922025.3 DUF1736 287..361 CDD:285594 32/73 (44%)
TPR_11 478..541 CDD:290150 21/68 (31%)
TPR_2 479..512 CDD:285020 10/32 (31%)
TPR repeat 479..507 CDD:276809 8/27 (30%)
TPR repeat 512..539 CDD:276809 11/32 (34%)
TPR_17 532..565 CDD:290167 11/38 (29%)
TPR repeat 544..572 CDD:276809 8/27 (30%)
TPR_11 545..609 CDD:290150 20/74 (27%)
TPR_11 578..643 CDD:290150 20/78 (26%)
TPR repeat 578..606 CDD:276809 11/37 (30%)
TPR repeat 611..641 CDD:276809 7/29 (24%)
TPR repeat 646..674 CDD:276809 12/28 (43%)
TPR_11 648..710 CDD:290150 22/70 (31%)
SNAP 655..>856 CDD:305195 45/210 (21%)
TPR repeat 661..711 CDD:276937 17/57 (30%)
TPR_14 685..722 CDD:290164 10/44 (23%)
TPR_19 693..756 CDD:291240 11/62 (18%)
TPR repeat 712..742 CDD:276809 5/29 (17%)
TPR repeat 715..760 CDD:276937 5/44 (11%)
TPR repeat 747..775 CDD:276809 0/27 (0%)
TPR repeat 763..814 CDD:276937 3/50 (6%)
TPR_11 784..850 CDD:290150 18/67 (27%)
TPR repeat 784..814 CDD:276809 3/29 (10%)
TPR repeat 815..851 CDD:276937 14/37 (38%)
TPR repeat 819..846 CDD:276809 10/28 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1320023at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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