DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tmtc2 and sxc

DIOPT Version :10

Sequence 1:NP_608558.1 Gene:Tmtc2 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_523620.1 Gene:sxc / 35486 FlyBaseID:FBgn0261403 Length:1059 Species:Drosophila melanogaster


Alignment Length:492 Identity:127/492 - (25%)
Similarity:192/492 - (39%) Gaps:98/492 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   515 PFLPASNLLFYVGFVVAERLLYLPSVGFCLL-------VGYGVSKLMSCNQRTR------NILLL 566
            |....|||:     |....:..|.|||...|       |.| .|....|.|..|      .:|||
  Fly    31 PNSTGSNLV-----VKQNDIQSLSSVGLLELAHREYQAVDY-ESAEKHCMQLWRQDSTNTGVLLL 89

  Fly   567 SFSLLLAAMSLRTLRRNADWRDEESLYRSAIAI--NP--PKALGNLGSVLSSQGRYEEAKQVLQE 627
            ..|:   ....|.|.::|.:        |.:||  ||  .:|..|||:|...:|:.:||....:.
  Fly    90 LSSI---HFQCRRLDKSAQF--------STLAIKQNPVLAEAYSNLGNVFKERGQLQEALDNYRR 143

  Fly   628 AIRFRPNMADVHFNLG------------------ILHQNQQVY----------------PAAVEC 658
            |:|.:|:..|.:.||.                  .|..|..:|                ..|..|
  Fly   144 AVRLKPDFIDGYINLAAALVAARDMESAVQAYITALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 208

  Fly   659 FQRAIKFRPNLAVAYLNLGISFIALGKRQQAIEILQAGSNLD----------GAAVRDRTAHDQA 713
            :.:||:..|..|||:.|||..|.|.|:...||...:....||          |..:::....|:|
  Fly   209 YLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRA 273

  Fly   714 RSSAYLQ--------------LGALYVEQGKLQRALAIYREALSSLPGLPQQREILYQRIGDVLG 764
             .:|||:              |..:|.|||.:..|:..||.|:...|..|.    .|..:.:.|.
  Fly   274 -VAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPD----AYCNLANALK 333

  Fly   765 RLQQWDEAERHHRAALELQPNQVAAHLSYGITLARNSSRASEAEMWFKRALKLAPEQASVYHHYA 829
            ...|..|||..:..||.|..|. |..|:....:.|......||...:.:||::.|:.|:.:.:.|
  Fly   334 EKGQVKEAEDCYNTALRLCSNH-ADSLNNLANIKREQGYIEEATRLYLKALEVFPDFAAAHSNLA 397

  Fly   830 EFLSLQSRHHESAIYHRRAAELAPNDYTLVVAAATAMRLLDRKVDAEMWYRKAVALRPGDAHAHT 894
            ..|..|.:..|:.::::.|..:.|............::.|.....|...|.:|:.:.|..|.||:
  Fly   398 SVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHS 462

  Fly   895 NLGAILHLLGRTNHAAASYKAALRLQPGDAITLGNLA 931
            ||.:|....|....|..||:.||:|:|.......|||
  Fly   463 NLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLA 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc2NP_608558.1 TMTC_DUF1736 270..343 CDD:462468
TPR 597..852 CDD:440225 80/316 (25%)
TPR repeat 602..630 CDD:276809 9/27 (33%)
TPR repeat 635..665 CDD:276809 10/63 (16%)
TPR repeat 670..694 CDD:276809 11/23 (48%)
TPR repeat 715..743 CDD:276809 12/41 (29%)
TPR repeat 748..782 CDD:276809 9/33 (27%)
TPR 780..>933 CDD:440225 40/152 (26%)
TPR repeat 787..816 CDD:276809 6/28 (21%)
TPR repeat 822..850 CDD:276809 6/27 (22%)
TPR repeat 855..885 CDD:276809 4/29 (14%)
TPR repeat 890..918 CDD:276809 11/27 (41%)
sxcNP_523620.1 TPR repeat 53..78 CDD:276809 6/25 (24%)
TPR 80..318 CDD:440225 62/249 (25%)
TPR repeat 86..112 CDD:276809 9/36 (25%)
TPR repeat 118..146 CDD:276809 9/27 (33%)
TPR repeat 151..181 CDD:276809 4/29 (14%)
LapB 219..486 CDD:442196 71/272 (26%)
TPR repeat 220..248 CDD:276809 11/27 (41%)
TPR repeat 255..282 CDD:276809 6/27 (22%)
TPR repeat 287..317 CDD:276809 9/29 (31%)
TPR repeat 322..350 CDD:276809 8/31 (26%)
TPR repeat 355..385 CDD:276809 7/30 (23%)
TPR repeat 390..418 CDD:276809 6/27 (22%)
TPR repeat 423..453 CDD:276809 4/29 (14%)
TPR repeat 458..486 CDD:276809 11/27 (41%)
Glyco_transf_41 505..1036 CDD:404688
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.