DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4341 and CG14921

DIOPT Version :9

Sequence 1:NP_608558.1 Gene:CG4341 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_609491.1 Gene:CG14921 / 34547 FlyBaseID:FBgn0032345 Length:240 Species:Drosophila melanogaster


Alignment Length:98 Identity:27/98 - (27%)
Similarity:44/98 - (44%) Gaps:29/98 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   681 IALGKRQQAI--EILQAGSNLDGAAVRDRTAHDQARSSAYLQLGALYVEQGKL--QRALAIY--- 738
            |.|.|:::.:  |:.|   .||..|:..:.          |::..|.||:.|.  ::||..|   
  Fly    67 IVLVKKEKGLWPEMF
Q---KLDKEALMQKR----------LEIADLIVERNKKRDEKALERYDNK 118

  Fly   739 REALSSLPGLPQQREILYQRIGDVLGRLQQWDE 771
            |.|       ..|:||  ||..|:..|::|:.|
  Fly   119 RRA-------EIQKEI--QRETDMRERVKQFQE 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4341NP_608558.1 PMT_2 112..>232 CDD:304453
DUF1736 275..343 CDD:285594
TPR_11 602..667 CDD:290150
TPR_1 602..634 CDD:278916
TPR repeat 602..630 CDD:276809
TPR repeat 635..665 CDD:276809
TPR_11 636..700 CDD:290150 5/20 (25%)
TPR_1 636..668 CDD:278916
TPR repeat 670..694 CDD:276809 4/14 (29%)
TPR_11 714..784 CDD:290150 19/63 (30%)
TPR repeat 715..743 CDD:276809 10/32 (31%)
TPR repeat 748..782 CDD:276809 9/24 (38%)
TPR_11 755..819 CDD:290150 6/17 (35%)
TPR repeat 787..816 CDD:276809
TPR_11 821..887 CDD:290150
TPR repeat 822..850 CDD:276809
TPR repeat 855..885 CDD:276809
TPR_11 <874..921 CDD:290150
TPR repeat 890..918 CDD:276809
CG14921NP_609491.1 p23_DYX1C1_like 4..81 CDD:107226 4/13 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.