DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tmtc2 and Ttc16

DIOPT Version :10

Sequence 1:NP_608558.1 Gene:Tmtc2 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_796358.2 Gene:Ttc16 / 338348 MGIID:2443048 Length:824 Species:Mus musculus


Alignment Length:371 Identity:76/371 - (20%)
Similarity:137/371 - (36%) Gaps:94/371 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   552 KLMSCNQRTRNILLLSFSLLLAAMSLRTLRRNADWRDEESLYRSAIAINPPKALGNLGSVLSSQG 616
            |...|.|..|:.|||.   .|.|.:...|::..| :.::||..:              |.|:.||
Mouse   233 KAKLCYQDLRSALLLD---PLHAQAKGLLQKMVD-QAKQSLQDA--------------STLAVQG 279

  Fly   617 RYEEAKQVLQEAIRFRPNMADVHFNLGILHQNQQVYPAAVECFQRAI------------KFRPNL 669
            :...|.:.:..||...|...:..|..|.|.:..|.:..|||.|.:|:            :.:..|
Mouse   280 KVHRALKCINCAIENNPLDPNFFFFRGTLRRRLQQFDHAVEDFLKAMDMVTDTQDNLVKQAQRQL 344

  Fly   670 AVAYLNLGISFIALGKRQQAIEILQAGSNLDGAAVRDRTAHDQARSSAYLQLGALYVEQGKLQRA 734
            .:.|.:..:.....|..|:.:.:|       ..|:||    :|.....|:..|..:.:.|.|..|
Mouse   345 LLTYNDFAVHCYNHGAYQEGVLLL-------NKAIRD----EQNEKGLYINRGDCFFQLGNLAFA 398

  Fly   735 LAIYREALSSLP---GLPQQREILYQRIGDVLGRLQQWDEAERHHRAALELQP------------ 784
            .|.|::||:..|   |...:..:|.:::|....:.:|:..||.|...|:...|            
Mouse   399 EADYKQALALSPLDEGANLRMGVLQEKLGFCQQKHRQFQTAEEHFSEAIRHSPQKPQYYLHRAKC 463

  Fly   785 -----NQVAAHLSYGITLARNSSRASEAEMWFKRALKLAPEQASVYHHYAEFLSLQSRHHESAIY 844
                 |.:.|.|.....|..|..               .|:.|:|.:.....:::::      :.
Mouse   464 RQFLQNTLGARLDVATVLLLNPE---------------YPKMAAVMNTLFPSMTVEN------VL 507

  Fly   845 HRRAAELAPNDYTLVV---------AAATAMRLLDRK---VDAEMW 878
            ..:.||||....:.::         .:....|||:|:   |..::|
Mouse   508 KSQVAELAKLQLSRMIENGPKNIYPQSTVVQRLLERRKAQVLVKLW 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc2NP_608558.1 TMTC_DUF1736 270..343 CDD:462468
TPR 597..852 CDD:440225 55/286 (19%)
TPR repeat 602..630 CDD:276809 6/27 (22%)
TPR repeat 635..665 CDD:276809 9/41 (22%)
TPR repeat 670..694 CDD:276809 3/23 (13%)
TPR repeat 715..743 CDD:276809 8/27 (30%)
TPR repeat 748..782 CDD:276809 7/33 (21%)
TPR 780..>933 CDD:440225 19/128 (15%)
TPR repeat 787..816 CDD:276809 4/28 (14%)
TPR repeat 822..850 CDD:276809 2/27 (7%)
TPR repeat 855..885 CDD:276809 6/36 (17%)
TPR repeat 890..918 CDD:276809
Ttc16NP_796358.2 TPR 72..272 CDD:440225 13/42 (31%)
TPR repeat 75..103 CDD:276809
TPR repeat 108..138 CDD:276809
TPR repeat 143..170 CDD:276809
TPR repeat 183..213 CDD:276809
TPR repeat 218..245 CDD:276809 4/11 (36%)
TPR 292..>474 CDD:440225 40/192 (21%)
TPR repeat 299..327 CDD:276809 9/27 (33%)
TPR repeat 347..373 CDD:276809 5/32 (16%)
TPR repeat 378..408 CDD:276809 9/29 (31%)
NlpI <394..569 CDD:443815 34/181 (19%)
TPR repeat 413..448 CDD:276809 8/34 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.