DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4341 and Tmtc2

DIOPT Version :9

Sequence 1:NP_608558.1 Gene:CG4341 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_796342.2 Gene:Tmtc2 / 278279 MGIID:1914057 Length:836 Species:Mus musculus


Alignment Length:914 Identity:346/914 - (37%)
Similarity:483/914 - (52%) Gaps:112/914 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LFCCSLAFVLYLNTLGAGFVYDDRRAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLC 100
            |...:|...||||||.|.|.|||.|||..|.|:...|||...|.||||||.||.||||.|:||||
Mouse     5 LVSSALGLALYLNTLSADFCYDDSRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLC 69

  Fly   101 VLSFRLNYLIGGGFAPWGFHLVNNLLHCVATALVVRVARTLLASVWAVLAAGALFAAHPIHTEAV 165
            .||||||:.| ||..||.:||||.|||...|.|..|.::.||...:....||.:||:||||||||
Mouse    70 TLSFRLNHAI-GGLNPWSYHLVNVLLHAAVTGLFTRFSKALLGDGYWTFMAGLMFASHPIHTEAV 133

  Fly   166 AGVVGRADLAACVCYLLTYLSYLRHMRWRESGDPRQWLALGATLILAAAGLLCKETAITALLVCA 230
            ||:|||||:.|.:.:||:.|.|::|...| ....|.|.....|.:.|...:|.||..:|.|.|.|
Mouse   134 AGIVGRADVGASLFFLLSLLCYIKHCSTR-GYSARTWGWFLGTGLCAGCSMLWKEQGVTVLAVSA 197

  Fly   231 LFDV-------MRGLSGQVDKQRLRSVCIVLGAL----FCMAYCRLVIVPGPQTAFSSADNPIAR 284
            ::||       |:.:...:.|::..|:.:.:..|    .|:...||..:.....:||::|||.|.
Mouse   198 VYDVFVFHRLKMKQILPTIYKRKNLSLFLSISLLTFWGTCLLGARLYWMGNKPPSFSNSDNPAAD 262

  Fly   285 TPSAWTRLLTFLYLPVFNLRLLLQPNVLSFDWGMDALPRVTSLWDRRNAQSACFYSVLVGVAWGS 349
            :.|...|.|||||||..||.|||.|:.|||||.|||:|.:.::.|.||..:..|||.|:.:|   
Mouse   263 SDSLLARTLTFLYLPTKNLWLLLCPDTLSFDWSMDAVPLLKTVCDWRNLHTVAFYSGLLLLA--- 324

  Fly   350 CRQLLSGSKEVTHCGVSSTFPQYHIQKVASRKSRSKRKRLANNTKYQAFEAAYHQQQQEALPCRD 414
                        :||:          |..|.:.....|.|.|                       
Mouse   325 ------------YCGL----------KNPSLEGECNGKALTN----------------------- 344

  Fly   415 CNNNNSSGYVYEGSSPVAQAPAQAPHLVSSAFRGSRSSSSCSNSTNSSSSSSSSSSSSSSSSSSL 479
             ...|::|:                              ||     .|.....:|....|.:|.:
Mouse   345 -GKQNANGH------------------------------SC-----HSDVEYRNSEMKPSFASKV 373

  Fly   480 SGGFQ-CSSKDYALEGMSPANRHACVLIMSLSFLALPFLPASNLLFYVGFVVAERLLYLPSVGFC 543
            ..|.: |..:...|    |:..:  ::|:|||.|.:||:||:||.||||||:|||:||:||:|||
Mouse   374 ENGIKNCVPQRTQL----PSTEN--IVILSLSLLIIPFIPATNLFFYVGFVIAERVLYIPSMGFC 432

  Fly   544 LLVGYGVSKLMSCNQR--TRNILLLSFSLLLAAMSLRTLRRNADWRDEESLYRSAIAINPPKALG 606
            ||:..|...|....|:  .::::..:.:.|:....::|..||.||::||.||||.|.:||.||.|
Mouse   433 LLITVGARALYVKVQKRFLKSLVFYATATLIVFYGVKTAIRNGDWQNEEMLYRSGIKVNPAKAWG 497

  Fly   607 NLGSVLSSQGRYEEAKQVLQEAIRFRPNMADVHFNLGILHQNQQVYPAAVECFQRAIKFRPNLAV 671
            |||:||.||.:..||:...:.|:.:|.||||:.:|||:|.|....:..|:..::.||..||.||.
Mouse   498 NLGNVLKSQSKISEAESAYRNALFYRSNMADMLYNLGLLLQENSRFAEALHYYKLAIGSRPTLAS 562

  Fly   672 AYLNLGISFIALGKRQQAIEILQAGSNLDGAAVRDRTAHDQARSSAYLQLGALYVEQGKLQRALA 736
            ||||.||..:..||.::|.......|.:....::|..||..:.:|....||.||.|||:.:.||:
Mouse   563 AYLNTGIILMNQGKTEEARRTFLKCSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGRYEEALS 627

  Fly   737 IYREALSSLPG--LPQQREILYQRIGDVLGRLQQWDEAERHHRAALELQPNQVAAHLSYGITLAR 799
            :||||:..:|.  .||.   ||..:|:...||.:..|||..:..:|..:.:.:.|||:||..||.
Mouse   628 VYREAIQKMPRHFAPQS---LYNMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLAL 689

  Fly   800 NSSRASEAEMWFKRALKLAPEQASVYHHYAEFLSLQSRHHESAIYHRRAAELAPNDYTLVVAAAT 864
             :.|.||||.:|.:|::|.|.:.:.|.||.:||..:||..|:|...::||||...::.:|..||.
Mouse   690 -TGRKSEAEKFFLKAIELDPTKGNCYMHYGQFLLEESRLTEAAEMAKKAAELDNTEFDVVFNAAH 753

  Fly   865 AMRLLDRKVDAEMWYRKAVALRPGDAHAHTNLGAILHLLGRTNHAAASYKAALRLQPGDAITLGN 929
            .:|.......||.:|..|..|||....|..||||||||.||...|.|:|..||:|:|.|.||..|
Mouse   754 MLRQASLNEAAEKYYDLAARLRPNYPAALMNLGAILHLNGRLQKAEANYLRALQLKPDDVITQSN 818

  Fly   930 LAKL 933
            |.||
Mouse   819 LRKL 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4341NP_608558.1 PMT_2 112..>232 CDD:304453 53/119 (45%)
DUF1736 275..343 CDD:285594 36/67 (54%)
TPR_11 602..667 CDD:290150 26/64 (41%)
TPR_1 602..634 CDD:278916 14/31 (45%)
TPR repeat 602..630 CDD:276809 13/27 (48%)
TPR repeat 635..665 CDD:276809 11/29 (38%)
TPR_11 636..700 CDD:290150 24/63 (38%)
TPR_1 636..668 CDD:278916 11/31 (35%)
TPR repeat 670..694 CDD:276809 10/23 (43%)
TPR_11 714..784 CDD:290150 26/71 (37%)
TPR repeat 715..743 CDD:276809 14/27 (52%)
TPR repeat 748..782 CDD:276809 11/33 (33%)
TPR_11 755..819 CDD:290150 24/63 (38%)
TPR repeat 787..816 CDD:276809 14/28 (50%)
TPR_11 821..887 CDD:290150 22/65 (34%)
TPR repeat 822..850 CDD:276809 10/27 (37%)
TPR repeat 855..885 CDD:276809 8/29 (28%)
TPR_11 <874..921 CDD:290150 24/46 (52%)
TPR repeat 890..918 CDD:276809 15/27 (56%)
Tmtc2NP_796342.2 DUF1736 247..321 CDD:285594 36/73 (49%)
TPR 1 460..492 13/31 (42%)
TPR_11 493..554 CDD:290150 24/60 (40%)
TPR 2 493..526 14/32 (44%)
TPR repeat 493..521 CDD:276809 13/27 (48%)
TPR_1 493..>520 CDD:278916 12/26 (46%)
TPR 3 527..560 12/32 (38%)
TPR repeat 527..555 CDD:276809 9/27 (33%)
TPR_12 557..634 CDD:290160 31/76 (41%)
TPR repeat 560..590 CDD:276809 12/29 (41%)
TPR 4 562..594 10/31 (32%)
TPR repeat 595..634 CDD:276809 17/38 (45%)
TPR 5 606..639 15/32 (47%)
TPR_2 609..639 CDD:285020 14/29 (48%)
ANAPC3 618..703 CDD:289650 34/88 (39%)
TPR repeat 642..671 CDD:276809 10/31 (32%)
TPR 6 643..676 10/35 (29%)
TPR 7 677..710 16/33 (48%)
TPR repeat 679..705 CDD:276809 14/26 (54%)
TPR repeat 710..774 CDD:276809 21/63 (33%)
TPR 8 712..744 13/31 (42%)
TPR 9 746..778 11/31 (35%)
TPR_19 755..822 CDD:291240 31/66 (47%)
TPR 10 779..812 18/32 (56%)
TPR_1 779..812 CDD:278916 18/32 (56%)
TPR repeat 779..807 CDD:276809 15/27 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 192 1.000 Domainoid score I3211
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H25521
Inparanoid 1 1.050 572 1.000 Inparanoid score I1050
Isobase 1 0.950 - 0 Normalized mean entropy S4190
OMA 1 1.010 - - QHG52430
OrthoDB 1 1.010 - - D1320023at2759
OrthoFinder 1 1.000 - - FOG0004694
OrthoInspector 1 1.000 - - otm44137
orthoMCL 1 0.900 - - OOG6_106232
Panther 1 1.100 - - LDO PTHR44216
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4791
SonicParanoid 1 1.000 - - X3302
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.820

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