DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc2 and Kdm6b

DIOPT Version :10

Sequence 1:NP_608558.1 Gene:Tmtc2 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:XP_030101676.1 Gene:Kdm6b / 216850 MGIID:2448492 Length:1642 Species:Mus musculus


Alignment Length:204 Identity:52/204 - (25%)
Similarity:77/204 - (37%) Gaps:54/204 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 YSVLVGVAWGSCRQLLSGSKEVTHCGVSSTFPQYHIQKVASRKSRSKRKRLANNTKYQAFEAAYH 403
            ::.|.|.|||..|:   ||                    |..:.:.:|..:.::..|.|...:.|
Mouse   284 WNTLHGDAWGPERK---GS--------------------APPERQEQRHSMPHSYPYPAPAYSAH 325

  Fly   404 QQQQEALPCRDCNNNNSSGYVYEGSSPVAQAPAQAP---HLVSSAFRGSRSSSSCSNSTNSS--- 462
            ......:|    |.....|....|:......||..|   .|..|..:.||..||.|.:.:::   
Mouse   326 PPSHRLVP----NTPLGPGPRPPGAESHGCLPATRPPGSDLRESRVQRSRMDSSVSPAASTACVP 386

  Fly   463 ----------SSSSSSSSSSSSSSSSLSG-----GFQCSS--KDYALEGMSPANRHACVLIMSLS 510
                      .:||||||||||:::.|.|     |...:.  ::.||| :||   |...|..|..
Mouse   387 YAPSRPPGLPGTSSSSSSSSSSNNTGLRGVEPSPGIPGADHYQNPALE-ISP---HQARLGPSAH 447

  Fly   511 FLALPFLPA 519
            ....|||.|
Mouse   448 SSRKPFLTA 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc2NP_608558.1 TMTC_DUF1736 270..343 CDD:462468 0/3 (0%)
TPR 597..852 CDD:440225
TPR repeat 602..630 CDD:276809
TPR repeat 635..665 CDD:276809
TPR repeat 670..694 CDD:276809
TPR repeat 715..743 CDD:276809
TPR repeat 748..782 CDD:276809
TPR 780..>933 CDD:440225
TPR repeat 787..816 CDD:276809
TPR repeat 822..850 CDD:276809
TPR repeat 855..885 CDD:276809
TPR repeat 890..918 CDD:276809
Kdm6bXP_030101676.1 BepA <90..154 CDD:443813
TPR repeat 106..136 CDD:276809
JmjC 1342..1406 CDD:214721
JmjC 1376..1484 CDD:396791
Blue background indicates that the domain is not in the aligned region.

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