DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc2 and F38B6.6

DIOPT Version :10

Sequence 1:NP_608558.1 Gene:Tmtc2 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_509123.2 Gene:F38B6.6 / 185454 WormBaseID:WBGene00018175 Length:690 Species:Caenorhabditis elegans


Alignment Length:814 Identity:210/814 - (25%)
Similarity:340/814 - (41%) Gaps:213/814 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LFCCSLAFVLYLNTLGAGFVYDDRRAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLC 100
            |...||:.:.||:.||..||:||..:|:.|..|:|..|..:.||.||||..::.|.||.|:||:.
 Worm    33 LILISLSIIPYLSCLGGDFVFDDAESIVNNPIVNGKDPLLQIFSRDFWGRSISSSNSHKSYRPVT 97

  Fly   101 VLSFRLNYLIGGGFAPWGFHLVNNLLHCVATALVVRVARTL--LASVWAV-LAAGALFAAHPIHT 162
            ..:|.|||.: ...:..|:|:||.:.|.|||.:..::.:.|  :...:.: .:|..|||.||:||
 Worm    98 TFTFWLNYKL-HETSTLGYHVVNIICHTVATLVFYKLGKQLEHIFDFFNIAFSASILFAVHPVHT 161

  Fly   163 EAVAGVVGRADLAACVCYLLTYLS---YLRHMRWRESGDPRQWLALGATLILAAAGLLCKETAIT 224
            ||||.:.|||:|      |:|..|   .:.|::.||..        ...::|.....|.||..:.
 Worm   162 EAVANITGRAEL------LMTIFSLAALILHVKNREIN--------CKFVLLVILSTLSKEQGLM 212

  Fly   225 ALLVCALFDVMRGLSGQVDKQRLRSVCIVLGALFCMAYCRLVIVPGPQTAFSSADNPIARTPSAW 289
            .:.:....|.:...|.:  ...:|.:|:    |..:.:.|:::.......|:..|||.|...|.:
 Worm   213 TIPIAICIDFLAHRSCR--SNFVRMICL----LVAIGFLRMMVNGFEAAKFTKLDNPTAFLNSKF 271

  Fly   290 TRLLTFLYLPVFNLRLLLQPNVLSFDWGMDALPRVTSLWDRRNAQSACFYS-VLVGVAWGSCRQL 353
            .|::.:.|:.:::..||:.|..|.||:.|..:..:|::||.|.......:: |::||        
 Worm   272 YRMINYTYIWLYHAYLLVIPVNLCFDYSMGCISSITTMWDLRALSPVLIFTIVIIGV-------- 328

  Fly   354 LSGSKEVTHCGVSSTFPQYHIQKVASRKSRSKRKRLANNTKYQAFEAAYHQQQQEALPCRDCNNN 418
                                                    |:|                .:|.  
 Worm   329 ----------------------------------------KFQ----------------NECR-- 335

  Fly   419 NSSGYVYEGSSPVAQAPAQAPHLVSSAFRGSRSSSSCSNSTNSSSSSSSSSSSSSSSSSSLSGGF 483
                                      ||                            :.|||.|  
 Worm   336 --------------------------AF----------------------------TLSSLMG-- 344

  Fly   484 QCSSKDYALEGMSPANRHACVLIMSLSFLALPFLPASNLLFYVGFVVAERLLYLPSVGFCLLVGY 548
                                         .:.||||||:.|.|||.:|||:|||||.|||||...
 Worm   345 -----------------------------IISFLPASNIFFTVGFSIAERVLYLPSAGFCLLCAI 380

  Fly   549 GVSKLMSCNQRTRNILLLSFSLLLAAMSLRTLRRNADWRDEESLYRSAIAINPPKAL--GNLGSV 611
            ...||   :...:|..:||.:|:|..:| :|.||:.:|:.|.|||.|.:::.|..|.  .|||.|
 Worm   381 IFKKL---SVHFKNADVLSITLILLLIS-KTYRRSGEWKTELSLYSSGLSVCPTNAKIHYNLGKV 441

  Fly   612 LSSQGRYEEAKQVLQEAIRFRPNMADVHFNLGILHQNQQVYPAAVECFQRAIKFRPNLAVAYLNL 676
            |...|..::|::....||:..|:......|||.|.:.......|.....||:..||:.|||::||
 Worm   442 LGDNGLTKDAEKNYWNAIKLDPSYEQALNNLGNLLEKSGDSKTAESLLARAVTLRPSFAVAWMNL 506

  Fly   677 GISFIALGKRQQA--------------------IEILQAGSNLDGAAV---RDRTAHDQARSSAY 718
            |||.:.|.|..:|                    :.:|...:|.|..|:   ::.|..|.:.|.::
 Worm   507 GISQMNLKKYYEAEKSLKNSLLIRPNSAHCLFNLGVLYQRTNRDEMAMSAWKNATRIDPSHSQSW 571

  Fly   719 LQLGALYVEQGKLQRALAIYREALSSLPGLPQQREILYQRIGDVLGRLQQWDEAERHHRAALELQ 783
            ..|..:.....:..:.:.:..:||||:|.  :.|  ::.:||....:...:..||.|.::|::|.
 Worm   572 TNLFVVLDHLSQCSQVIDLSYQALSSVPN--ESR--VHMQIGSCHAKHSNFTAAENHIKSAIDLN 632

  Fly   784 PNQVAAHLSYGITLARNSSRASEAEMWFKRALKL 817
            |..|..|.:.|| |.:..||..|||..::..|.|
 Worm   633 PTSVLFHANLGI-LYQRMSRHKEAESQYRIVLAL 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc2NP_608558.1 TMTC_DUF1736 270..343 CDD:462468 20/73 (27%)
TPR 597..852 CDD:440225 66/246 (27%)
TPR repeat 602..630 CDD:276809 9/29 (31%)
TPR repeat 635..665 CDD:276809 7/29 (24%)
TPR repeat 670..694 CDD:276809 11/43 (26%)
TPR repeat 715..743 CDD:276809 3/27 (11%)
TPR repeat 748..782 CDD:276809 7/33 (21%)
TPR 780..>933 CDD:440225 14/38 (37%)
TPR repeat 787..816 CDD:276809 10/28 (36%)
TPR repeat 822..850 CDD:276809
TPR repeat 855..885 CDD:276809
TPR repeat 890..918 CDD:276809
F38B6.6NP_509123.2 TMTC_DUF1736 251..325 CDD:462468 19/73 (26%)
TPR 425..>595 CDD:440225 40/169 (24%)
TPR repeat 432..460 CDD:276809 9/27 (33%)
TPR repeat 467..494 CDD:276809 7/26 (27%)
TPR repeat 499..529 CDD:276809 11/29 (38%)
NrfG 518..679 CDD:443378 35/153 (23%)
TPR repeat 534..560 CDD:276809 4/25 (16%)
TPR repeat 568..596 CDD:276809 3/27 (11%)
TPR repeat 601..631 CDD:276809 7/31 (23%)
TPR repeat 636..664 CDD:276809 10/28 (36%)
Blue background indicates that the domain is not in the aligned region.

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