DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4341 and Ifit3

DIOPT Version :9

Sequence 1:NP_608558.1 Gene:CG4341 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:XP_011245453.1 Gene:Ifit3 / 15959 MGIID:1101055 Length:434 Species:Mus musculus


Alignment Length:264 Identity:59/264 - (22%)
Similarity:106/264 - (40%) Gaps:61/264 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   616 GRYEEAKQVLQEAIRFRP-------NMADVHFNLGILHQNQQVYPAAVECFQRAIKFRPNLAVAY 673
            ||.|.||...::|:..:|       .||...|.|....:.|    .:|:..::|::..|.  ..|
Mouse   181 GRNERAKMCFEKALEEKPKDPECSSGMAIAMFRLEEKPEKQ----FSVDALKQAMELNPQ--NQY 239

  Fly   674 LNLGISFIALGKRQQAIEILQAGSNLDG-AAVRDRTAHDQARSSAYLQLGALYVEQGKLQRALAI 737
            |.:.:          |:::|:.|...:| ..::|.......::....:....|.::|.|.||:.:
Mouse   240 LKVLL----------ALKLLRMGEEAEGERLIKDALGKAPNQTDVLQKAAQFYKKKGNLDRAIEL 294

  Fly   738 YREALSSLPGLPQQREILYQRIGDVLGRLQ---QWDEAERHHRAA----LELQPNQVAAHLSYGI 795
            ..:||.|.........::..|..::|.:||   ..|.:||..|.|    |.::..|.        
Mouse   295 LGKALRSTVNNSPLYSLVMCRYREILEQLQNKGDADSSERRQRMAELRRLTMEFMQK-------- 351

  Fly   796 TLARNSSRAS---------EAEMWFKRAL-KLAP--EQASVYHHYAEFLSLQSRHHESAIYHRRA 848
            ||.|..|..:         |.|..::..: |.:|  |:..:|..|.   :||.       |||::
Mouse   352 TLQRRRSPLNSYSDLIDFPEVERCYQMVISKESPDVEEEDLYERYC---NLQE-------YHRKS 406

  Fly   849 AELA 852
            .:||
Mouse   407 EDLA 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4341NP_608558.1 PMT_2 112..>232 CDD:304453
DUF1736 275..343 CDD:285594
TPR_11 602..667 CDD:290150 14/57 (25%)
TPR_1 602..634 CDD:278916 7/24 (29%)
TPR repeat 602..630 CDD:276809 6/13 (46%)
TPR repeat 635..665 CDD:276809 7/29 (24%)
TPR_11 636..700 CDD:290150 12/63 (19%)
TPR_1 636..668 CDD:278916 6/31 (19%)
TPR repeat 670..694 CDD:276809 3/23 (13%)
TPR_11 714..784 CDD:290150 18/76 (24%)
TPR repeat 715..743 CDD:276809 6/27 (22%)
TPR repeat 748..782 CDD:276809 10/40 (25%)
TPR_11 755..819 CDD:290150 18/80 (23%)
TPR repeat 787..816 CDD:276809 6/38 (16%)
TPR_11 821..887 CDD:290150 9/32 (28%)
TPR repeat 822..850 CDD:276809 7/27 (26%)
TPR repeat 855..885 CDD:276809
TPR_11 <874..921 CDD:290150
TPR repeat 890..918 CDD:276809
Ifit3XP_011245453.1 TPR_12 82..157 CDD:315987
TPR repeat 82..110 CDD:276809
PEP_TPR_lipo <87..>331 CDD:274350 34/165 (21%)
TPR repeat 115..154 CDD:276809
TPR repeat 167..195 CDD:276809 6/13 (46%)
TPR repeat 200..233 CDD:276809 7/36 (19%)
TPR repeat 272..300 CDD:276809 6/27 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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