DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc2 and LOC1278343

DIOPT Version :10

Sequence 1:NP_608558.1 Gene:Tmtc2 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:XP_061509938.1 Gene:LOC1278343 / 1278343 VectorBaseID:AGAMI1_010612 Length:407 Species:Anopheles gambiae


Alignment Length:170 Identity:41/170 - (24%)
Similarity:62/170 - (36%) Gaps:51/170 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   670 AVAYLNLGISFIALGK-RQQAIEILQAGSNLDGAAVRDRTAHDQARSSAYLQLGALYVEQGKLQR 733
            ||:..|..|....:.| ||:..|.||.               ::|...|.|.||...::.|.|..
Mosquito   145 AVSIGNFDIKQNLINKRRQERNEALQT---------------EEAEPGAILALGMREIKNGNLDN 194

  Fly   734 ALAIYREALSSLPGLPQQREILYQRIGDVLGRLQQWDEAERHHRAALEL-QPNQVAAHLSYGITL 797
            |:....:||          |:.......::.|          .|..|:| :|.:........:.|
Mosquito   195 AVLFISKAL----------EMNNNDQNALVAR----------SRCFLQLGEPGKALQDAETALVL 239

  Fly   798 ARNSSRA--SEAE------------MWFKRALKLAPEQAS 823
            .:|:.||  .:||            |:|.|.|:|.||.||
Mosquito   240 DKNNIRAIYQKAEALYYLGQFEHSLMFFHRGLRLRPELAS 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc2NP_608558.1 TMTC_DUF1736 270..343 CDD:462468
TPR 597..852 CDD:440225 41/170 (24%)
TPR repeat 602..630 CDD:276809
TPR repeat 635..665 CDD:276809
TPR repeat 670..694 CDD:276809 8/24 (33%)
TPR repeat 715..743 CDD:276809 8/27 (30%)
TPR repeat 748..782 CDD:276809 4/33 (12%)
TPR 780..>933 CDD:440225 18/59 (31%)
TPR repeat 787..816 CDD:276809 9/42 (21%)
TPR repeat 822..850 CDD:276809 2/2 (100%)
TPR repeat 855..885 CDD:276809
TPR repeat 890..918 CDD:276809
LOC1278343XP_061509938.1 None
Blue background indicates that the domain is not in the aligned region.

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