DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4341 and ifit5

DIOPT Version :9

Sequence 1:NP_608558.1 Gene:CG4341 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_001135660.1 Gene:ifit5 / 100216220 XenbaseID:XB-GENE-5842099 Length:473 Species:Xenopus tropicalis


Alignment Length:333 Identity:68/333 - (20%)
Similarity:122/333 - (36%) Gaps:81/333 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   618 YEEAKQVLQEAIRFRPNMADVHFNLGILHQNQQVYPAAVEC--------------------FQRA 662
            ||.||...:||::..|:  |..:|.|:         |.|.|                    .:||
 Frog   153 YERAKGCFEEAVKGNPD--DPEWNTGL---------ATVVCRLEEFRGRNCPAFKSVSFQLLERA 206

  Fly   663 IKFRPNLAVAYLNLGISFIALGKRQQAIEILQAGSNLDGAAVRDRTAHDQARSSAYL--QLGALY 725
            :|..|..:|..:.|.:....|.::::|::.:             :.|.:......|:  .:...|
 Frog   207 VKLNPKDSVIKVLLALKLQELKRQEEAMKHI-------------KDALELTPDLPYVLRYVAKFY 258

  Fly   726 VEQGKLQRALAIYREALSSLP---------GLPQQREILY-QRIGDVLGRLQQWDE-------AE 773
            ...||.:..:.:.::|:|..|         ||..::.|:. :|.|....|.|...|       |.
 Frog   259 RRAGKFEETIRVLKKAVSITPNSGFLHHQLGLCYRQMIIQRKRTGKANYRGQDTQEIKDLTEKAI 323

  Fly   774 RHHRAALELQPNQVAAHLSYGITLARNSSRASEAEMWFKRALKL--APEQASVYHH--YAEFLSL 834
            .|...|||::...:.||........| |::..:||..:|:|.:|  .||......|  |.:||..
 Frog   324 FHFEMALEMKKTFLHAHFDLADMYVR-SNQYQKAEETYKKATELITTPEHEKQQAHLQYGKFLEN 387

  Fly   835 QSRHHESAIYHRRAAELAPNDYTLVVAAATAMRLLDRKVDAEMWYRKAVALRPGDAHAHTNLGAI 899
            ..:..:.|:...:.....|:..|             .:.:.||..|:....|.......|:..|:
 Frog   388 SKKSEDEAVEQYKEGLRIPDQNT-------------HRQECEMCLRRIANQRLARNSRDTSALAL 439

  Fly   900 LHLLGRTN 907
            |..:.:.|
 Frog   440 LGFISKEN 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4341NP_608558.1 PMT_2 112..>232 CDD:304453
DUF1736 275..343 CDD:285594
TPR_11 602..667 CDD:290150 16/68 (24%)
TPR_1 602..634 CDD:278916 6/15 (40%)
TPR repeat 602..630 CDD:276809 6/11 (55%)
TPR repeat 635..665 CDD:276809 8/49 (16%)
TPR_11 636..700 CDD:290150 14/83 (17%)
TPR_1 636..668 CDD:278916 9/51 (18%)
TPR repeat 670..694 CDD:276809 4/23 (17%)
TPR_11 714..784 CDD:290150 20/88 (23%)
TPR repeat 715..743 CDD:276809 5/29 (17%)
TPR repeat 748..782 CDD:276809 11/41 (27%)
TPR_11 755..819 CDD:290150 19/73 (26%)
TPR repeat 787..816 CDD:276809 8/28 (29%)
TPR_11 821..887 CDD:290150 10/67 (15%)
TPR repeat 822..850 CDD:276809 5/29 (17%)
TPR repeat 855..885 CDD:276809 4/29 (14%)
TPR_11 <874..921 CDD:290150 8/34 (24%)
TPR repeat 890..918 CDD:276809 4/18 (22%)
ifit5NP_001135660.1 PEP_TPR_lipo <144..>405 CDD:274350 58/276 (21%)
TPR repeat 219..242 CDD:276809 4/35 (11%)
TPR repeat 248..276 CDD:276809 5/27 (19%)
TPR repeat 281..332 CDD:276809 12/50 (24%)
TPR repeat 337..365 CDD:276809 8/28 (29%)
TPR repeat 375..404 CDD:276809 5/28 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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